Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.33■□□□□ 0.52
EPHA4P54764 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHA4P54764 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHA4P54764 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.33■□□□□ 0.52
EPHA4P54764 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.33■□□□□ 0.52
EPHA4P54764 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.33■□□□□ 0.52
EPHA4P54764 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 MYC-208ENST00000641036 567 ntBASIC18.33■□□□□ 0.52
EPHA4P54764 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.33■□□□□ 0.52
EPHA4P54764 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHA4P54764 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
EPHA4P54764 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
EPHA4P54764 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHA4P54764 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHA4P54764 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
EPHA4P54764 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.32■□□□□ 0.52
EPHA4P54764 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHA4P54764 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.32■□□□□ 0.52
EPHA4P54764 AC008622.2-201ENST00000617006 1229 ntBASIC18.32■□□□□ 0.52
EPHA4P54764 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.32■□□□□ 0.52
EPHA4P54764 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHA4P54764 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHA4P54764 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA4P54764 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
EPHA4P54764 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
EPHA4P54764 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
EPHA4P54764 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA4P54764 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.31■□□□□ 0.52
EPHA4P54764 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.31■□□□□ 0.52
EPHA4P54764 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA4P54764 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.31■□□□□ 0.52
EPHA4P54764 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA4P54764 MIR4674-201ENST00000582457 87 ntBASIC18.31■□□□□ 0.52
EPHA4P54764 AL023973.1-201ENST00000624619 620 ntBASIC18.31■□□□□ 0.52
EPHA4P54764 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHA4P54764 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHA4P54764 Z82202.1-201ENST00000623446 1880 ntBASIC18.31■□□□□ 0.52
EPHA4P54764 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.3■□□□□ 0.52
EPHA4P54764 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHA4P54764 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.3■□□□□ 0.52
EPHA4P54764 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
EPHA4P54764 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
EPHA4P54764 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EPHA4P54764 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.3■□□□□ 0.52
EPHA4P54764 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EPHA4P54764 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
EPHA4P54764 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
EPHA4P54764 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.3■□□□□ 0.52
EPHA4P54764 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
EPHA4P54764 AC009947.2-201ENST00000444014 672 ntBASIC18.3■□□□□ 0.52
EPHA4P54764 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 AL441883.1-201ENST00000566170 1045 ntBASIC18.3■□□□□ 0.52
EPHA4P54764 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
EPHA4P54764 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EPHA4P54764 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
EPHA4P54764 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHA4P54764 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHA4P54764 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHA4P54764 KRT8P3-201ENST00000519669 1449 ntBASIC18.3■□□□□ 0.52
EPHA4P54764 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms