Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.96■□□□□ 0.95
PMS1P54277 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.95■□□□□ 0.95
PMS1P54277 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.95■□□□□ 0.94
PMS1P54277 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.95■□□□□ 0.94
PMS1P54277 C1QBPP2-201ENST00000528754 825 ntBASIC20.95■□□□□ 0.94
PMS1P54277 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.95■□□□□ 0.94
PMS1P54277 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.95■□□□□ 0.94
PMS1P54277 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.95■□□□□ 0.94
PMS1P54277 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.95■□□□□ 0.94
PMS1P54277 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMS1P54277 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 NIFKP9-201ENST00000419265 221 ntBASIC20.94■□□□□ 0.94
PMS1P54277 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PMS1P54277 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.94■□□□□ 0.94
PMS1P54277 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.94■□□□□ 0.94
PMS1P54277 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PMS1P54277 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.94■□□□□ 0.94
PMS1P54277 AC083906.6-201ENST00000641366 219 ntBASIC20.94■□□□□ 0.94
PMS1P54277 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PMS1P54277 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.94■□□□□ 0.94
PMS1P54277 HTR7P1-201ENST00000538670 1336 ntBASIC20.94■□□□□ 0.94
PMS1P54277 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PMS1P54277 AC005082.1-201ENST00000413042 2259 ntBASIC20.94■□□□□ 0.94
PMS1P54277 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.94■□□□□ 0.94
PMS1P54277 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.94■□□□□ 0.94
PMS1P54277 KRT8P11-201ENST00000409686 1436 ntBASIC20.94■□□□□ 0.94
PMS1P54277 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMS1P54277 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PMS1P54277 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.93■□□□□ 0.94
PMS1P54277 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.93■□□□□ 0.94
PMS1P54277 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
PMS1P54277 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.93■□□□□ 0.94
PMS1P54277 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.93■□□□□ 0.94
PMS1P54277 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.93■□□□□ 0.94
PMS1P54277 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.93■□□□□ 0.94
PMS1P54277 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PMS1P54277 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.93■□□□□ 0.94
PMS1P54277 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PMS1P54277 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS1P54277 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.92■□□□□ 0.94
PMS1P54277 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.92■□□□□ 0.94
PMS1P54277 RPPH1-201ENST00000516869 333 ntBASIC20.92■□□□□ 0.94
PMS1P54277 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS1P54277 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.92■□□□□ 0.94
PMS1P54277 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PMS1P54277 AC007613.1-201ENST00000572811 2597 ntBASIC20.92■□□□□ 0.94
PMS1P54277 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms