Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HMGA2P52926 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGA2P52926 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGA2P52926 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.39■□□□□ 0.38
HMGA2P52926 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HMGA2P52926 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGA2P52926 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGA2P52926 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HMGA2P52926 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGA2P52926 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGA2P52926 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGA2P52926 TSPY23P-201ENST00000440136 739 ntBASIC17.39■□□□□ 0.37
HMGA2P52926 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGA2P52926 AC097658.1-201ENST00000475555 843 ntBASIC17.39■□□□□ 0.37
HMGA2P52926 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGA2P52926 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGA2P52926 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGA2P52926 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGA2P52926 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.39■□□□□ 0.37
HMGA2P52926 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HMGA2P52926 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGA2P52926 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
HMGA2P52926 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGA2P52926 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGA2P52926 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HMGA2P52926 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGA2P52926 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
HMGA2P52926 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HMGA2P52926 AC126763.1-201ENST00000552015 2118 ntBASIC17.39■□□□□ 0.37
HMGA2P52926 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGA2P52926 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HMGA2P52926 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGA2P52926 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HMGA2P52926 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.38■□□□□ 0.37
HMGA2P52926 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGA2P52926 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.38■□□□□ 0.37
HMGA2P52926 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGA2P52926 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.38■□□□□ 0.37
HMGA2P52926 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HMGA2P52926 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
HMGA2P52926 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.38■□□□□ 0.37
HMGA2P52926 AL160286.2-201ENST00000567150 934 ntBASIC17.38■□□□□ 0.37
HMGA2P52926 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGA2P52926 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HMGA2P52926 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HMGA2P52926 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGA2P52926 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGA2P52926 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMGA2P52926 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGA2P52926 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HMGA2P52926 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGA2P52926 HEIH-201ENST00000623091 1652 ntBASIC17.37■□□□□ 0.37
HMGA2P52926 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGA2P52926 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.37■□□□□ 0.37
HMGA2P52926 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 MIR4758-201ENST00000577688 71 ntBASIC17.37■□□□□ 0.37
HMGA2P52926 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HMGA2P52926 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGA2P52926 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms