Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 TMC6-223ENST00000592594 551 ntTSL 415.01□□□□□ -0.015e-8■■□□□ 13
NCBP2P52298 TMC6-207ENST00000586697 571 ntTSL 413.61□□□□□ -0.235e-8■■□□□ 13
NCBP2P52298 TMC6-221ENST00000592063 743 ntTSL 512.75□□□□□ -0.375e-8■■□□□ 13
NCBP2P52298 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.11e-8■■□□□ 13
NCBP2P52298 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.311e-8■■□□□ 13
NCBP2P52298 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.331e-8■■□□□ 13
NCBP2P52298 METTL17-216ENST00000555533 1605 ntTSL 1 (best)11.94□□□□□ -0.51e-8■■□□□ 13
NCBP2P52298 METTL17-217ENST00000555640 2887 ntTSL 510.96□□□□□ -0.661e-8■■□□□ 13
NCBP2P52298 METTL17-224ENST00000557550 1529 ntTSL 510.59□□□□□ -0.711e-8■■□□□ 13
NCBP2P52298 METTL17-225ENST00000557701 552 ntTSL 28.92□□□□□ -0.981e-8■■□□□ 13
NCBP2P52298 METTL17-209ENST00000554588 1077 ntTSL 28.2□□□□□ -1.11e-8■■□□□ 13
NCBP2P52298 METTL17-213ENST00000554985 596 ntTSL 28.08□□□□□ -1.121e-8■■□□□ 13
NCBP2P52298 METTL17-220ENST00000556442 582 ntTSL 28.08□□□□□ -1.121e-8■■□□□ 13
NCBP2P52298 METTL17-214ENST00000555177 572 ntTSL 28.08□□□□□ -1.121e-8■■□□□ 13
NCBP2P52298 METTL17-206ENST00000553564 900 ntTSL 56.9□□□□□ -1.31e-8■■□□□ 13
NCBP2P52298 METTL17-212ENST00000554949 576 ntTSL 36.8□□□□□ -1.321e-8■■□□□ 13
NCBP2P52298 BAX-207ENST00000502487 1346 ntTSL 1 (best)24.42■■□□□ 1.52e-6■■□□□ 13
NCBP2P52298 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.282e-6■■□□□ 13
NCBP2P52298 SPATS2-212ENST00000549298 643 ntTSL 322.03■■□□□ 1.122e-6■■□□□ 13
NCBP2P52298 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.092e-6■■□□□ 13
NCBP2P52298 SPATS2-211ENST00000549179 570 ntTSL 420.94■□□□□ 0.942e-6■■□□□ 13
NCBP2P52298 SPATS2-218ENST00000551540 720 ntTSL 520.94■□□□□ 0.942e-6■■□□□ 13
NCBP2P52298 SPATS2-214ENST00000549412 2781 ntTSL 220.17■□□□□ 0.822e-6■■□□□ 13
NCBP2P52298 BAX-211ENST00000513545 775 ntTSL 319.88■□□□□ 0.772e-6■■□□□ 13
NCBP2P52298 ADAT1-202ENST00000562374 582 ntTSL 419.8■□□□□ 0.762e-6■■□□□ 13
NCBP2P52298 SDF4-206ENST00000478938 2591 ntTSL 219.3■□□□□ 0.682e-6■■□□□ 13
NCBP2P52298 SDF4-205ENST00000465727 2095 ntTSL 218.39■□□□□ 0.532e-6■■□□□ 13
NCBP2P52298 TYK2-218ENST00000531836 644 ntTSL 418.02■□□□□ 0.482e-6■■□□□ 13
NCBP2P52298 TYK2-216ENST00000530829 720 ntTSL 517.8■□□□□ 0.442e-6■■□□□ 13
NCBP2P52298 COMMD4-213ENST00000565834 1671 ntTSL 517.66■□□□□ 0.422e-6■■□□□ 13
NCBP2P52298 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.322e-6■■□□□ 13
NCBP2P52298 COMMD4-208ENST00000563220 1897 ntTSL 217.04■□□□□ 0.322e-6■■□□□ 13
NCBP2P52298 COMMD4-222ENST00000568034 1085 ntTSL 516.75■□□□□ 0.272e-6■■□□□ 13
NCBP2P52298 COMMD4-218ENST00000567377 461 ntTSL 316.62■□□□□ 0.252e-6■■□□□ 13
NCBP2P52298 MAP3K11-206ENST00000527304 5605 nt16.61■□□□□ 0.252e-6■■□□□ 13
NCBP2P52298 VPS52-214ENST00000463486 925 ntTSL 516.31■□□□□ 0.22e-6■■□□□ 13
NCBP2P52298 COMMD4-204ENST00000561662 482 ntTSL 316.08■□□□□ 0.162e-6■■□□□ 13
NCBP2P52298 COMMD4-220ENST00000567720 544 ntTSL 415.95■□□□□ 0.142e-6■■□□□ 13
NCBP2P52298 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.84■□□□□ 0.132e-6■■□□□ 13
NCBP2P52298 BAX-209ENST00000506183 383 ntTSL 1 (best)15.84■□□□□ 0.132e-6■■□□□ 13
NCBP2P52298 VPS52-215ENST00000464425 1060 ntTSL 515.72■□□□□ 0.112e-6■■□□□ 13
NCBP2P52298 COMMD4-224ENST00000568877 770 ntTSL 215.61■□□□□ 0.092e-6■■□□□ 13
NCBP2P52298 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.3■□□□□ 0.042e-6■■□□□ 13
NCBP2P52298 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.012e-6■■□□□ 13
NCBP2P52298 COMMD4-206ENST00000562610 850 ntTSL 314.88□□□□□ -0.032e-6■■□□□ 13
NCBP2P52298 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.88□□□□□ -0.032e-6■■□□□ 13
NCBP2P52298 COMMD4-210ENST00000564587 588 ntTSL 214.7□□□□□ -0.062e-6■■□□□ 13
NCBP2P52298 BAX-204ENST00000356483 677 ntTSL 1 (best)14.62□□□□□ -0.072e-6■■□□□ 13
NCBP2P52298 COMMD4-215ENST00000566843 2284 ntTSL 214.61□□□□□ -0.072e-6■■□□□ 13
NCBP2P52298 BAX-208ENST00000503726 488 ntTSL 214.61□□□□□ -0.072e-6■■□□□ 13
NCBP2P52298 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.49□□□□□ -0.092e-6■■□□□ 13
NCBP2P52298 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.36□□□□□ -0.112e-6■■□□□ 13
NCBP2P52298 SDF4-207ENST00000494748 3516 ntTSL 214.3□□□□□ -0.122e-6■■□□□ 13
NCBP2P52298 BAX-212ENST00000515540 300 ntTSL 314.29□□□□□ -0.122e-6■■□□□ 13
NCBP2P52298 COMMD4-212ENST00000565517 536 ntTSL 414.21□□□□□ -0.132e-6■■□□□ 13
NCBP2P52298 MAP3K11-203ENST00000524856 3787 ntTSL 214.1□□□□□ -0.152e-6■■□□□ 13
NCBP2P52298 COMMD4-219ENST00000567399 976 ntTSL 514.1□□□□□ -0.152e-6■■□□□ 13
NCBP2P52298 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.71□□□□□ -0.212e-6■■□□□ 13
NCBP2P52298 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.7□□□□□ -0.222e-6■■□□□ 13
NCBP2P52298 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.232e-6■■□□□ 13
NCBP2P52298 SPATS2-216ENST00000550643 527 ntTSL 413.64□□□□□ -0.232e-6■■□□□ 13
NCBP2P52298 SPATS2-217ENST00000550997 675 ntTSL 513.53□□□□□ -0.242e-6■■□□□ 13
NCBP2P52298 COMMD4-223ENST00000568301 666 ntTSL 513.53□□□□□ -0.242e-6■■□□□ 13
NCBP2P52298 MAP3K11-204ENST00000526293 571 ntTSL 413.37□□□□□ -0.272e-6■■□□□ 13
NCBP2P52298 MAP3K11-207ENST00000529839 561 ntTSL 413.36□□□□□ -0.272e-6■■□□□ 13
NCBP2P52298 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.26□□□□□ -0.292e-6■■□□□ 13
NCBP2P52298 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.332e-6■■□□□ 13
NCBP2P52298 COMMD4-216ENST00000567023 926 ntTSL 212.93□□□□□ -0.342e-6■■□□□ 13
NCBP2P52298 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.362e-6■■□□□ 13
NCBP2P52298 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.8□□□□□ -0.362e-6■■□□□ 13
NCBP2P52298 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.8□□□□□ -0.362e-6■■□□□ 13
NCBP2P52298 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.372e-6■■□□□ 13
NCBP2P52298 SDF4-203ENST00000403997 728 ntTSL 312.17□□□□□ -0.462e-6■■□□□ 13
NCBP2P52298 COMMD4-209ENST00000564068 4204 nt12.07□□□□□ -0.482e-6■■□□□ 13
NCBP2P52298 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.05□□□□□ -0.482e-6■■□□□ 13
NCBP2P52298 COMMD4-214ENST00000566230 490 ntTSL 311.99□□□□□ -0.492e-6■■□□□ 13
NCBP2P52298 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.97□□□□□ -0.492e-6■■□□□ 13
NCBP2P52298 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC11.94□□□□□ -0.52e-6■■□□□ 13
NCBP2P52298 CEPT1-205ENST00000476865 783 ntTSL 511.94□□□□□ -0.52e-6■■□□□ 13
NCBP2P52298 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC11.66□□□□□ -0.542e-6■■□□□ 13
NCBP2P52298 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.552e-6■■□□□ 13
NCBP2P52298 SPATS2-213ENST00000549375 1061 ntTSL 211.3□□□□□ -0.62e-6■■□□□ 13
NCBP2P52298 CEPT1-209ENST00000498239 1957 ntTSL 1 (best)11.14□□□□□ -0.632e-6■■□□□ 13
NCBP2P52298 SPATS2-207ENST00000548710 558 ntTSL 411.01□□□□□ -0.652e-6■■□□□ 13
NCBP2P52298 SLC25A25-201ENST00000373064 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.662e-6■■□□□ 13
NCBP2P52298 CEPT1-201ENST00000357172 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.672e-6■■□□□ 13
NCBP2P52298 SLC25A25-202ENST00000373066 3714 ntTSL 1 (best) BASIC10.85□□□□□ -0.672e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC10.68□□□□□ -0.74e-12■■□□□ 13
NCBP2P52298 CEPT1-210ENST00000545121 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.752e-6■■□□□ 13
NCBP2P52298 VPS52-217ENST00000478934 2602 ntTSL 210.21□□□□□ -0.772e-6■■□□□ 13
NCBP2P52298 COMMD4-203ENST00000480484 3225 ntTSL 1 (best)9.3□□□□□ -0.922e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-350ENST00000629603 874 ntTSL 59.19□□□□□ -0.944e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-353ENST00000629836 723 ntTSL 59.19□□□□□ -0.944e-12■■□□□ 13
NCBP2P52298 CEPT1-207ENST00000480324 2110 ntTSL 29.12□□□□□ -0.952e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-326ENST00000628308 996 ntTSL 59.08□□□□□ -0.964e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-239ENST00000457076 542 ntTSL 48.72□□□□□ -1.014e-12■■□□□ 13
NCBP2P52298 ADAT1-204ENST00000565109 574 ntTSL 48.45□□□□□ -1.062e-6■■□□□ 13
NCBP2P52298 ADAL-206ENST00000565555 519 ntTSL 28.26□□□□□ -1.092e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC7.72□□□□□ -1.174e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-205ENST00000413791 743 ntTSL 27.53□□□□□ -1.24e-12■■□□□ 13
Retrieved 100 of 18,329 protein–RNA pairs in 294.6 ms