Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.77■□□□□ 0.92
CASP4P49662 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CASP4P49662 NUDT16P1-203ENST00000513809 620 ntBASIC20.77■□□□□ 0.92
CASP4P49662 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.77■□□□□ 0.92
CASP4P49662 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.77■□□□□ 0.92
CASP4P49662 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.77■□□□□ 0.92
CASP4P49662 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.77■□□□□ 0.92
CASP4P49662 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CASP4P49662 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CASP4P49662 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.77■□□□□ 0.92
CASP4P49662 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASP4P49662 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.77■□□□□ 0.91
CASP4P49662 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.77■□□□□ 0.91
CASP4P49662 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CASP4P49662 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CASP4P49662 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP4P49662 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.76■□□□□ 0.91
CASP4P49662 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP4P49662 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.76■□□□□ 0.91
CASP4P49662 MIR718-201ENST00000390190 70 ntBASIC20.76■□□□□ 0.91
CASP4P49662 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.76■□□□□ 0.91
CASP4P49662 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.76■□□□□ 0.91
CASP4P49662 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.76■□□□□ 0.91
CASP4P49662 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.76■□□□□ 0.91
CASP4P49662 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CASP4P49662 AP001412.1-201ENST00000608405 714 ntBASIC20.76■□□□□ 0.91
CASP4P49662 AC026471.5-201ENST00000615068 467 ntBASIC20.76■□□□□ 0.91
CASP4P49662 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.76■□□□□ 0.91
CASP4P49662 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP4P49662 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP4P49662 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP4P49662 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP4P49662 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP4P49662 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CASP4P49662 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.75■□□□□ 0.91
CASP4P49662 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.75■□□□□ 0.91
CASP4P49662 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.75■□□□□ 0.91
CASP4P49662 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CASP4P49662 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CASP4P49662 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.75■□□□□ 0.91
CASP4P49662 AC116562.2-201ENST00000507042 360 ntBASIC20.75■□□□□ 0.91
CASP4P49662 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.75■□□□□ 0.91
CASP4P49662 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.75■□□□□ 0.91
CASP4P49662 REXO1L10P-201ENST00000615707 1290 ntBASIC20.75■□□□□ 0.91
CASP4P49662 REXO1L12P-201ENST00000622156 912 ntBASIC20.75■□□□□ 0.91
CASP4P49662 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CASP4P49662 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP4P49662 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CASP4P49662 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASP4P49662 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CASP4P49662 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASP4P49662 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.74■□□□□ 0.91
CASP4P49662 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.74■□□□□ 0.91
CASP4P49662 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASP4P49662 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.74■□□□□ 0.91
CASP4P49662 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASP4P49662 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CASP4P49662 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CASP4P49662 FAM207BP-201ENST00000447172 505 ntBASIC20.74■□□□□ 0.91
CASP4P49662 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.74■□□□□ 0.91
CASP4P49662 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CASP4P49662 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.74■□□□□ 0.91
CASP4P49662 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.74■□□□□ 0.91
CASP4P49662 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CASP4P49662 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASP4P49662 FSCN1P1-201ENST00000568912 1481 ntBASIC20.74■□□□□ 0.91
CASP4P49662 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CASP4P49662 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.73■□□□□ 0.91
CASP4P49662 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP4P49662 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CASP4P49662 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CASP4P49662 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
CASP4P49662 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.73■□□□□ 0.91
CASP4P49662 AL596275.1-201ENST00000423464 877 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms