Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.25■□□□□ 0.35
CENPAP49450 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPAP49450 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CENPAP49450 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CENPAP49450 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CENPAP49450 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CENPAP49450 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CENPAP49450 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CENPAP49450 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.24■□□□□ 0.35
CENPAP49450 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CENPAP49450 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 AC069152.1-201ENST00000438030 544 ntBASIC17.24■□□□□ 0.35
CENPAP49450 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.24■□□□□ 0.35
CENPAP49450 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.24■□□□□ 0.35
CENPAP49450 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CENPAP49450 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CENPAP49450 AC120498.8-201ENST00000614275 531 ntBASIC17.24■□□□□ 0.35
CENPAP49450 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.24■□□□□ 0.35
CENPAP49450 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.24■□□□□ 0.35
CENPAP49450 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CENPAP49450 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPAP49450 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CENPAP49450 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.23■□□□□ 0.35
CENPAP49450 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 AL355802.2-201ENST00000402069 882 ntBASIC17.23■□□□□ 0.35
CENPAP49450 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.23■□□□□ 0.35
CENPAP49450 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.23■□□□□ 0.35
CENPAP49450 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.23■□□□□ 0.35
CENPAP49450 AC104771.1-201ENST00000603335 964 ntBASIC17.23■□□□□ 0.35
CENPAP49450 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CENPAP49450 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
CENPAP49450 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPAP49450 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPAP49450 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.23■□□□□ 0.35
CENPAP49450 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CENPAP49450 KRT8P8-201ENST00000434750 1448 ntBASIC17.22■□□□□ 0.35
CENPAP49450 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.22■□□□□ 0.35
CENPAP49450 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CENPAP49450 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPAP49450 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CENPAP49450 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CENPAP49450 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.22■□□□□ 0.35
CENPAP49450 AC008687.6-201ENST00000596318 630 ntBASIC17.22■□□□□ 0.35
CENPAP49450 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.22■□□□□ 0.35
CENPAP49450 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.22■□□□□ 0.35
CENPAP49450 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPAP49450 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CENPAP49450 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CENPAP49450 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPAP49450 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.21■□□□□ 0.35
CENPAP49450 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPAP49450 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPAP49450 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPAP49450 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.21■□□□□ 0.35
CENPAP49450 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPAP49450 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms