Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC13.18□□□□□ -0.3
PCP4P48539 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PCP4P48539 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.18□□□□□ -0.3
PCP4P48539 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PCP4P48539 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.18□□□□□ -0.3
PCP4P48539 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 OXCT2P1-201ENST00000447263 1535 ntBASIC13.18□□□□□ -0.3
PCP4P48539 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCP4P48539 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.17□□□□□ -0.3
PCP4P48539 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
PCP4P48539 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 LSR-205ENST00000427250 1606 ntTSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.17□□□□□ -0.3
PCP4P48539 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PCP4P48539 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.17□□□□□ -0.3
PCP4P48539 AC144831.1-201ENST00000573312 2656 ntBASIC13.17□□□□□ -0.3
PCP4P48539 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PCP4P48539 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.17□□□□□ -0.3
PCP4P48539 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.17□□□□□ -0.3
PCP4P48539 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.17□□□□□ -0.3
PCP4P48539 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PCP4P48539 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCP4P48539 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PCP4P48539 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
PCP4P48539 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PCP4P48539 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PCP4P48539 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.16□□□□□ -0.3
PCP4P48539 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.16□□□□□ -0.3
PCP4P48539 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.16□□□□□ -0.3
PCP4P48539 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PCP4P48539 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
PCP4P48539 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 SNX18-202ENST00000343017 3140 ntBASIC13.16□□□□□ -0.3
PCP4P48539 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.16□□□□□ -0.3
PCP4P48539 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.16□□□□□ -0.3
PCP4P48539 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCP4P48539 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC13.16□□□□□ -0.3
PCP4P48539 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PCP4P48539 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PCP4P48539 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.15□□□□□ -0.3
PCP4P48539 NORAD-201ENST00000565493 5339 ntBASIC13.15□□□□□ -0.3
PCP4P48539 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PCP4P48539 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 SBF1P1-201ENST00000444527 5631 ntBASIC13.15□□□□□ -0.3
PCP4P48539 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms