Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL359075.1-203ENST00000462729 1002 ntBASIC20.28■□□□□ 0.84
BRCC3P46736 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.28■□□□□ 0.84
BRCC3P46736 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.28■□□□□ 0.84
BRCC3P46736 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
BRCC3P46736 CR769767.2-201ENST00000622735 460 ntBASIC20.28■□□□□ 0.84
BRCC3P46736 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
BRCC3P46736 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.28■□□□□ 0.84
BRCC3P46736 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.28■□□□□ 0.84
BRCC3P46736 GPAT2P1-201ENST00000444924 1672 ntBASIC20.28■□□□□ 0.84
BRCC3P46736 TEX21P-204ENST00000641479 1693 ntBASIC20.28■□□□□ 0.84
BRCC3P46736 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.28■□□□□ 0.84
BRCC3P46736 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.27■□□□□ 0.84
BRCC3P46736 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
BRCC3P46736 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCC3P46736 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCC3P46736 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCC3P46736 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCC3P46736 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
BRCC3P46736 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BRCC3P46736 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 KRT18P38-201ENST00000449496 1282 ntBASIC20.27■□□□□ 0.84
BRCC3P46736 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.27■□□□□ 0.84
BRCC3P46736 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
BRCC3P46736 AL031432.5-201ENST00000641059 760 ntBASIC20.27■□□□□ 0.84
BRCC3P46736 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCC3P46736 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCC3P46736 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRCC3P46736 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRCC3P46736 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.26■□□□□ 0.83
BRCC3P46736 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.26■□□□□ 0.83
BRCC3P46736 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
BRCC3P46736 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BRCC3P46736 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
BRCC3P46736 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.26■□□□□ 0.83
BRCC3P46736 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.26■□□□□ 0.83
BRCC3P46736 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRCC3P46736 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
BRCC3P46736 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 AC073130.3-201ENST00000624389 2278 ntBASIC20.25■□□□□ 0.83
BRCC3P46736 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BRCC3P46736 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
BRCC3P46736 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.25■□□□□ 0.83
BRCC3P46736 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BRCC3P46736 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.25■□□□□ 0.83
BRCC3P46736 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.25■□□□□ 0.83
BRCC3P46736 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.25■□□□□ 0.83
BRCC3P46736 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.25■□□□□ 0.83
BRCC3P46736 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.25■□□□□ 0.83
BRCC3P46736 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.25■□□□□ 0.83
BRCC3P46736 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.25■□□□□ 0.83
BRCC3P46736 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.25■□□□□ 0.83
BRCC3P46736 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.25■□□□□ 0.83
BRCC3P46736 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRCC3P46736 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRCC3P46736 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRCC3P46736 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
BRCC3P46736 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRCC3P46736 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRCC3P46736 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRCC3P46736 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.24■□□□□ 0.83
BRCC3P46736 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRCC3P46736 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms