Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
MTHFRP42898 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MTHFRP42898 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MTHFRP42898 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MTHFRP42898 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MTHFRP42898 KRT17P6-201ENST00000453795 1220 ntBASIC19.9■□□□□ 0.78
MTHFRP42898 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MTHFRP42898 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.9■□□□□ 0.78
MTHFRP42898 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
MTHFRP42898 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
MTHFRP42898 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MTHFRP42898 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.9■□□□□ 0.78
MTHFRP42898 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MTHFRP42898 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
MTHFRP42898 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MTHFRP42898 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MTHFRP42898 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MTHFRP42898 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MTHFRP42898 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MTHFRP42898 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
MTHFRP42898 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MTHFRP42898 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MTHFRP42898 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.89■□□□□ 0.77
MTHFRP42898 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.89■□□□□ 0.77
MTHFRP42898 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.89■□□□□ 0.77
MTHFRP42898 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.89■□□□□ 0.77
MTHFRP42898 AC016734.2-201ENST00000624325 1377 ntBASIC19.89■□□□□ 0.77
MTHFRP42898 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MTHFRP42898 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MTHFRP42898 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
MTHFRP42898 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 KRT8P10-201ENST00000450021 1447 ntBASIC19.88■□□□□ 0.77
MTHFRP42898 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.88■□□□□ 0.77
MTHFRP42898 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.88■□□□□ 0.77
MTHFRP42898 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.88■□□□□ 0.77
MTHFRP42898 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.88■□□□□ 0.77
MTHFRP42898 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MTHFRP42898 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MTHFRP42898 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
MTHFRP42898 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.88■□□□□ 0.77
MTHFRP42898 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MTHFRP42898 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.87■□□□□ 0.77
MTHFRP42898 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.87■□□□□ 0.77
MTHFRP42898 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.87■□□□□ 0.77
MTHFRP42898 MIR3180-1-201ENST00000580374 94 ntBASIC19.87■□□□□ 0.77
MTHFRP42898 MIR3180-3-201ENST00000584616 94 ntBASIC19.87■□□□□ 0.77
MTHFRP42898 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.87■□□□□ 0.77
MTHFRP42898 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.87■□□□□ 0.77
MTHFRP42898 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.87■□□□□ 0.77
MTHFRP42898 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.87■□□□□ 0.77
MTHFRP42898 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.87■□□□□ 0.77
MTHFRP42898 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.87■□□□□ 0.77
MTHFRP42898 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.87■□□□□ 0.77
MTHFRP42898 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
MTHFRP42898 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFRP42898 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
MTHFRP42898 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.86■□□□□ 0.77
MTHFRP42898 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.86■□□□□ 0.77
MTHFRP42898 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
MTHFRP42898 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms