Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHC1P29353 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC1P29353 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 AL353807.1-201ENST00000427475 662 ntBASIC17.45■□□□□ 0.38
SHC1P29353 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC1P29353 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC1P29353 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.45■□□□□ 0.38
SHC1P29353 AC020763.4-201ENST00000623414 4170 ntBASIC17.45■□□□□ 0.38
SHC1P29353 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 AL135905.2-201ENST00000584934 1404 ntBASIC17.45■□□□□ 0.38
SHC1P29353 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC1P29353 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.45■□□□□ 0.38
SHC1P29353 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.44■□□□□ 0.38
SHC1P29353 ZNF815P-204ENST00000434898 1737 ntBASIC17.44■□□□□ 0.38
SHC1P29353 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SHC1P29353 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SHC1P29353 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SHC1P29353 TSPY7P-201ENST00000431358 1114 ntBASIC17.44■□□□□ 0.38
SHC1P29353 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHC1P29353 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.44■□□□□ 0.38
SHC1P29353 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHC1P29353 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 AC073195.1-201ENST00000607241 877 ntBASIC17.44■□□□□ 0.38
SHC1P29353 CR392000.1-201ENST00000624770 1228 ntBASIC17.44■□□□□ 0.38
SHC1P29353 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.44■□□□□ 0.38
SHC1P29353 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.44■□□□□ 0.38
SHC1P29353 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SHC1P29353 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.44■□□□□ 0.38
SHC1P29353 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.44■□□□□ 0.38
SHC1P29353 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SHC1P29353 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC1P29353 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 AC104417.2-201ENST00000562989 1793 ntBASIC17.43■□□□□ 0.38
SHC1P29353 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.43■□□□□ 0.38
SHC1P29353 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.43■□□□□ 0.38
SHC1P29353 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SHC1P29353 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.43■□□□□ 0.38
SHC1P29353 KSR1P1-201ENST00000446298 240 ntBASIC17.43■□□□□ 0.38
SHC1P29353 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SHC1P29353 SNORA78-201ENST00000459373 127 ntBASIC17.43■□□□□ 0.38
SHC1P29353 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.43■□□□□ 0.38
SHC1P29353 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.43■□□□□ 0.38
SHC1P29353 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SHC1P29353 CD177P1-201ENST00000606252 935 ntBASIC17.43■□□□□ 0.38
SHC1P29353 AL445675.2-201ENST00000620291 557 ntBASIC17.43■□□□□ 0.38
SHC1P29353 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SHC1P29353 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.43■□□□□ 0.38
SHC1P29353 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC1P29353 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SHC1P29353 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.42■□□□□ 0.38
SHC1P29353 SDHAP1-207ENST00000440850 2000 ntBASIC17.42■□□□□ 0.38
SHC1P29353 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SHC1P29353 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 KRT16P1-201ENST00000399124 1418 ntBASIC17.42■□□□□ 0.38
SHC1P29353 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC1P29353 MIR718-201ENST00000390190 70 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms