Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB4AP20338 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB4AP20338 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB4AP20338 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB4AP20338 AC116050.2-201ENST00000612102 1779 ntBASIC14.57□□□□□ -0.08
RAB4AP20338 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RAB4AP20338 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB4AP20338 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB4AP20338 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB4AP20338 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
RAB4AP20338 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB4AP20338 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB4AP20338 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB4AP20338 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB4AP20338 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB4AP20338 IGHV3-19-201ENST00000521488 291 ntBASIC14.57□□□□□ -0.08
RAB4AP20338 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB4AP20338 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB4AP20338 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RAB4AP20338 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB4AP20338 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB4AP20338 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB4AP20338 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RAB4AP20338 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
RAB4AP20338 AL365209.1-201ENST00000624418 6473 ntBASIC14.56□□□□□ -0.08
RAB4AP20338 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB4AP20338 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB4AP20338 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RAB4AP20338 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB4AP20338 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB4AP20338 AC245052.3-201ENST00000450182 901 ntBASIC14.56□□□□□ -0.08
RAB4AP20338 AC126544.1-201ENST00000580842 1059 ntBASIC14.56□□□□□ -0.08
RAB4AP20338 AC105233.4-201ENST00000642045 216 ntBASIC14.56□□□□□ -0.08
RAB4AP20338 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
RAB4AP20338 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB4AP20338 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAB4AP20338 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB4AP20338 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB4AP20338 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 CROCCP3-202ENST00000420820 1947 ntBASIC14.55□□□□□ -0.08
RAB4AP20338 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RAB4AP20338 CICP6-201ENST00000457191 2729 ntBASIC14.55□□□□□ -0.08
RAB4AP20338 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB4AP20338 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB4AP20338 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB4AP20338 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB4AP20338 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB4AP20338 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB4AP20338 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
RAB4AP20338 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB4AP20338 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB4AP20338 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB4AP20338 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms