Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBL4AP11441 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UBL4AP11441 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBL4AP11441 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
UBL4AP11441 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
UBL4AP11441 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.6■□□□□ 0.41
UBL4AP11441 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBL4AP11441 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.6■□□□□ 0.41
UBL4AP11441 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UBL4AP11441 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UBL4AP11441 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBL4AP11441 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UBL4AP11441 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBL4AP11441 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.59■□□□□ 0.41
UBL4AP11441 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.59■□□□□ 0.41
UBL4AP11441 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.59■□□□□ 0.41
UBL4AP11441 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.59■□□□□ 0.41
UBL4AP11441 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.59■□□□□ 0.41
UBL4AP11441 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.59■□□□□ 0.41
UBL4AP11441 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
UBL4AP11441 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBL4AP11441 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.59■□□□□ 0.41
UBL4AP11441 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.59■□□□□ 0.41
UBL4AP11441 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.58■□□□□ 0.41
UBL4AP11441 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBL4AP11441 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
UBL4AP11441 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.58■□□□□ 0.41
UBL4AP11441 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBL4AP11441 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
UBL4AP11441 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.58■□□□□ 0.4
UBL4AP11441 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
UBL4AP11441 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 GCSHP5-201ENST00000443090 522 ntBASIC17.58■□□□□ 0.4
UBL4AP11441 KSR1P1-201ENST00000446298 240 ntBASIC17.58■□□□□ 0.4
UBL4AP11441 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.58■□□□□ 0.4
UBL4AP11441 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.58■□□□□ 0.4
UBL4AP11441 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.58■□□□□ 0.4
UBL4AP11441 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.58■□□□□ 0.4
UBL4AP11441 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.58■□□□□ 0.4
UBL4AP11441 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.58■□□□□ 0.4
UBL4AP11441 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.58■□□□□ 0.4
UBL4AP11441 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.58■□□□□ 0.4
UBL4AP11441 AC131212.4-201ENST00000623606 975 ntBASIC17.58■□□□□ 0.4
UBL4AP11441 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.58■□□□□ 0.4
UBL4AP11441 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
UBL4AP11441 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBL4AP11441 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBL4AP11441 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.58■□□□□ 0.4
UBL4AP11441 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
UBL4AP11441 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
UBL4AP11441 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
UBL4AP11441 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UBL4AP11441 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 AF186192.3-201ENST00000583427 947 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms