Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LAMP1P11279 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LAMP1P11279 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LAMP1P11279 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.06■□□□□ 0.48
LAMP1P11279 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LAMP1P11279 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LAMP1P11279 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.06■□□□□ 0.48
LAMP1P11279 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.06■□□□□ 0.48
LAMP1P11279 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LAMP1P11279 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LAMP1P11279 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LAMP1P11279 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LAMP1P11279 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.06■□□□□ 0.48
LAMP1P11279 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
LAMP1P11279 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LAMP1P11279 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LAMP1P11279 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
LAMP1P11279 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LAMP1P11279 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LAMP1P11279 KRASP1-201ENST00000407852 552 ntBASIC18.05■□□□□ 0.48
LAMP1P11279 TSPY23P-201ENST00000440136 739 ntBASIC18.05■□□□□ 0.48
LAMP1P11279 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LAMP1P11279 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.05■□□□□ 0.48
LAMP1P11279 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LAMP1P11279 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.05■□□□□ 0.48
LAMP1P11279 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LAMP1P11279 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LAMP1P11279 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.04■□□□□ 0.48
LAMP1P11279 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 KRT8P41-201ENST00000533985 1514 ntBASIC18.04■□□□□ 0.48
LAMP1P11279 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.04■□□□□ 0.48
LAMP1P11279 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
LAMP1P11279 ESRRAP1-201ENST00000400596 1257 ntBASIC18.04■□□□□ 0.48
LAMP1P11279 AC239809.2-201ENST00000415381 517 ntBASIC18.04■□□□□ 0.48
LAMP1P11279 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LAMP1P11279 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LAMP1P11279 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.04■□□□□ 0.48
LAMP1P11279 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.04■□□□□ 0.48
LAMP1P11279 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LAMP1P11279 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LAMP1P11279 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LAMP1P11279 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.03■□□□□ 0.48
LAMP1P11279 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.03■□□□□ 0.48
LAMP1P11279 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.03■□□□□ 0.48
LAMP1P11279 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.03■□□□□ 0.48
LAMP1P11279 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
LAMP1P11279 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.03■□□□□ 0.48
LAMP1P11279 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.03■□□□□ 0.48
LAMP1P11279 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.03■□□□□ 0.48
LAMP1P11279 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LAMP1P11279 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.03■□□□□ 0.48
LAMP1P11279 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
LAMP1P11279 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.03■□□□□ 0.48
LAMP1P11279 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.03■□□□□ 0.48
LAMP1P11279 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LAMP1P11279 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LAMP1P11279 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
LAMP1P11279 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LAMP1P11279 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LAMP1P11279 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.02■□□□□ 0.48
LAMP1P11279 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
LAMP1P11279 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
LAMP1P11279 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LAMP1P11279 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LAMP1P11279 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms