Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 KRT8P45-201ENST00000414328 1447 ntBASIC14.89□□□□□ -0.03
CD28P10747 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CD28P10747 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CD28P10747 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.88□□□□□ -0.03
CD28P10747 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.88□□□□□ -0.03
CD28P10747 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.88□□□□□ -0.03
CD28P10747 AL031133.1-201ENST00000406807 723 ntBASIC14.88□□□□□ -0.03
CD28P10747 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.88□□□□□ -0.03
CD28P10747 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.88□□□□□ -0.03
CD28P10747 PRSS44-201ENST00000515154 1146 ntBASIC14.88□□□□□ -0.03
CD28P10747 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.88□□□□□ -0.03
CD28P10747 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.88□□□□□ -0.03
CD28P10747 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.88□□□□□ -0.03
CD28P10747 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CD28P10747 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CD28P10747 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.88□□□□□ -0.03
CD28P10747 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CD28P10747 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.88□□□□□ -0.03
CD28P10747 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.88□□□□□ -0.03
CD28P10747 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD28P10747 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.87□□□□□ -0.03
CD28P10747 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.87□□□□□ -0.03
CD28P10747 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.87□□□□□ -0.03
CD28P10747 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 UPK3BP1-201ENST00000428678 509 ntBASIC14.87□□□□□ -0.03
CD28P10747 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.87□□□□□ -0.03
CD28P10747 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.87□□□□□ -0.03
CD28P10747 AC091076.1-201ENST00000610741 619 ntBASIC14.87□□□□□ -0.03
CD28P10747 MYC-208ENST00000641036 567 ntBASIC14.87□□□□□ -0.03
CD28P10747 AL031432.5-201ENST00000641059 760 ntBASIC14.87□□□□□ -0.03
CD28P10747 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD28P10747 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CD28P10747 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CD28P10747 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.86□□□□□ -0.03
CD28P10747 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.86□□□□□ -0.03
CD28P10747 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CD28P10747 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 AL359075.1-203ENST00000462729 1002 ntBASIC14.86□□□□□ -0.03
CD28P10747 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.86□□□□□ -0.03
CD28P10747 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.86□□□□□ -0.03
CD28P10747 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.86□□□□□ -0.03
CD28P10747 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.86□□□□□ -0.03
CD28P10747 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.86□□□□□ -0.03
CD28P10747 AL441883.1-201ENST00000566170 1045 ntBASIC14.86□□□□□ -0.03
CD28P10747 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.86□□□□□ -0.03
CD28P10747 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms