Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 CCR12P-201ENST00000446203 998 ntBASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCNYL3P0C7X3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 AC116562.4-202ENST00000641738 218 ntBASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.35■□□□□ 0.53
CCNYL3P0C7X3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 AC116562.4-201ENST00000641316 2276 ntBASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 MFAP1P1-201ENST00000442257 1255 ntBASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNYL3P0C7X3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNYL3P0C7X3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCNYL3P0C7X3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms