Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
COL5A2P05997 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 LINC00167-201ENST00000530583 1419 ntBASIC25.1■■□□□ 1.61
COL5A2P05997 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 HLA-A-201ENST00000376802 1334 ntBASIC25.1■■□□□ 1.61
COL5A2P05997 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL5A2P05997 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL5A2P05997 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL5A2P05997 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL5A2P05997 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC25.09■■□□□ 1.61
COL5A2P05997 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC25.09■■□□□ 1.61
COL5A2P05997 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC25.09■■□□□ 1.61
COL5A2P05997 CALM3-211ENST00000598871 561 ntTSL 4 BASIC25.09■■□□□ 1.61
COL5A2P05997 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC25.09■■□□□ 1.61
COL5A2P05997 AC120114.3-201ENST00000611923 658 ntBASIC25.09■■□□□ 1.61
COL5A2P05997 VPS51-217ENST00000639871 243 ntTSL 5 BASIC25.09■■□□□ 1.61
COL5A2P05997 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL5A2P05997 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.09■■□□□ 1.61
COL5A2P05997 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL5A2P05997 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL5A2P05997 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL5A2P05997 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL5A2P05997 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL5A2P05997 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC25.09■■□□□ 1.61
COL5A2P05997 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC25.09■■□□□ 1.61
COL5A2P05997 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
COL5A2P05997 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
COL5A2P05997 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL5A2P05997 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL5A2P05997 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL5A2P05997 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL5A2P05997 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
COL5A2P05997 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL5A2P05997 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL5A2P05997 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
COL5A2P05997 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC25.08■■□□□ 1.61
COL5A2P05997 AC233702.3-201ENST00000578656 1387 ntBASIC25.08■■□□□ 1.61
COL5A2P05997 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL5A2P05997 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL5A2P05997 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL5A2P05997 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC25.08■■□□□ 1.6
COL5A2P05997 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
COL5A2P05997 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC25.08■■□□□ 1.6
COL5A2P05997 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
COL5A2P05997 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC25.08■■□□□ 1.6
COL5A2P05997 TK1-205ENST00000590862 642 ntTSL 3 BASIC25.08■■□□□ 1.6
COL5A2P05997 AL353801.3-201ENST00000609898 542 ntBASIC25.08■■□□□ 1.6
COL5A2P05997 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL5A2P05997 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
COL5A2P05997 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.07■■□□□ 1.6
COL5A2P05997 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.07■■□□□ 1.6
COL5A2P05997 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL5A2P05997 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL5A2P05997 AL391422.3-201ENST00000603791 2761 ntBASIC25.07■■□□□ 1.6
COL5A2P05997 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL5A2P05997 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC25.07■■□□□ 1.6
COL5A2P05997 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.07■■□□□ 1.6
COL5A2P05997 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL5A2P05997 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC25.07■■□□□ 1.6
COL5A2P05997 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
COL5A2P05997 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
COL5A2P05997 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL5A2P05997 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL5A2P05997 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL5A2P05997 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
COL5A2P05997 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.06■■□□□ 1.6
COL5A2P05997 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL5A2P05997 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC25.06■■□□□ 1.6
COL5A2P05997 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
COL5A2P05997 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC25.06■■□□□ 1.6
COL5A2P05997 AC010240.3-201ENST00000607688 395 ntBASIC25.06■■□□□ 1.6
COL5A2P05997 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL5A2P05997 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
COL5A2P05997 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL5A2P05997 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC25.06■■□□□ 1.6
COL5A2P05997 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL5A2P05997 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
COL5A2P05997 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
COL5A2P05997 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC25.06■■□□□ 1.6
COL5A2P05997 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL5A2P05997 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL5A2P05997 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
COL5A2P05997 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
COL5A2P05997 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL5A2P05997 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL5A2P05997 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL5A2P05997 ABR-204ENST00000543210 1049 ntTSL 2 BASIC25.05■■□□□ 1.6
COL5A2P05997 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC25.05■■□□□ 1.6
COL5A2P05997 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC25.05■■□□□ 1.6
COL5A2P05997 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL5A2P05997 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL5A2P05997 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
COL5A2P05997 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL5A2P05997 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL5A2P05997 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms