Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LMNAP02545 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.86■□□□□ 0.77
LMNAP02545 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.86■□□□□ 0.77
LMNAP02545 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.86■□□□□ 0.77
LMNAP02545 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.86■□□□□ 0.77
LMNAP02545 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.86■□□□□ 0.77
LMNAP02545 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LMNAP02545 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.86■□□□□ 0.77
LMNAP02545 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LMNAP02545 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.86■□□□□ 0.77
LMNAP02545 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LMNAP02545 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LMNAP02545 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.85■□□□□ 0.77
LMNAP02545 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.85■□□□□ 0.77
LMNAP02545 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
LMNAP02545 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.85■□□□□ 0.77
LMNAP02545 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.85■□□□□ 0.77
LMNAP02545 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.85■□□□□ 0.77
LMNAP02545 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.85■□□□□ 0.77
LMNAP02545 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.85■□□□□ 0.77
LMNAP02545 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LMNAP02545 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LMNAP02545 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LMNAP02545 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.84■□□□□ 0.77
LMNAP02545 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 INGX-201ENST00000359239 846 ntBASIC19.84■□□□□ 0.77
LMNAP02545 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 MESTP1-201ENST00000404287 994 ntBASIC19.84■□□□□ 0.77
LMNAP02545 AC097488.1-201ENST00000507834 756 ntBASIC19.84■□□□□ 0.77
LMNAP02545 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.84■□□□□ 0.77
LMNAP02545 AC026271.3-201ENST00000571884 352 ntBASIC19.84■□□□□ 0.77
LMNAP02545 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.84■□□□□ 0.77
LMNAP02545 AL138966.2-201ENST00000621997 464 ntBASIC19.84■□□□□ 0.77
LMNAP02545 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LMNAP02545 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LMNAP02545 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.84■□□□□ 0.77
LMNAP02545 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNAP02545 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMNAP02545 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LMNAP02545 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LMNAP02545 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LMNAP02545 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.83■□□□□ 0.77
LMNAP02545 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
LMNAP02545 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMNAP02545 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMNAP02545 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
LMNAP02545 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMNAP02545 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMNAP02545 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMNAP02545 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMNAP02545 COX11P1-201ENST00000489116 835 ntBASIC19.83■□□□□ 0.77
LMNAP02545 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.83■□□□□ 0.77
LMNAP02545 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.83■□□□□ 0.77
LMNAP02545 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMNAP02545 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.83■□□□□ 0.76
LMNAP02545 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.83■□□□□ 0.76
LMNAP02545 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
LMNAP02545 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.83■□□□□ 0.76
LMNAP02545 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMNAP02545 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMNAP02545 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LMNAP02545 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LMNAP02545 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMNAP02545 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms