Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.97■■□□□ 1.27
COL1A1P02452 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.97■■□□□ 1.27
COL1A1P02452 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A1P02452 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL1A1P02452 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A1P02452 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
COL1A1P02452 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.97■■□□□ 1.27
COL1A1P02452 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.97■■□□□ 1.27
COL1A1P02452 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.97■■□□□ 1.27
COL1A1P02452 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.97■■□□□ 1.27
COL1A1P02452 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.97■■□□□ 1.27
COL1A1P02452 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A1P02452 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
COL1A1P02452 CLEC4GP1-201ENST00000596555 870 ntBASIC22.97■■□□□ 1.27
COL1A1P02452 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.97■■□□□ 1.27
COL1A1P02452 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A1P02452 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
COL1A1P02452 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.97■■□□□ 1.27
COL1A1P02452 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A1P02452 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.96■■□□□ 1.27
COL1A1P02452 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.96■■□□□ 1.27
COL1A1P02452 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.96■■□□□ 1.27
COL1A1P02452 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
COL1A1P02452 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.96■■□□□ 1.27
COL1A1P02452 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.96■■□□□ 1.27
COL1A1P02452 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A1P02452 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.27
COL1A1P02452 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
COL1A1P02452 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
COL1A1P02452 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.95■■□□□ 1.26
COL1A1P02452 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL1A1P02452 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL1A1P02452 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.95■■□□□ 1.26
COL1A1P02452 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.95■■□□□ 1.26
COL1A1P02452 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC22.95■■□□□ 1.26
COL1A1P02452 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
COL1A1P02452 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 STARP1-201ENST00000397973 869 ntBASIC22.94■■□□□ 1.26
COL1A1P02452 AC112907.2-201ENST00000448639 330 ntBASIC22.94■■□□□ 1.26
COL1A1P02452 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.94■■□□□ 1.26
COL1A1P02452 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
COL1A1P02452 ZNF444P1-201ENST00000559497 298 ntBASIC22.94■■□□□ 1.26
COL1A1P02452 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.94■■□□□ 1.26
COL1A1P02452 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
COL1A1P02452 AC140113.3-201ENST00000605663 199 ntBASIC22.94■■□□□ 1.26
COL1A1P02452 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.94■■□□□ 1.26
COL1A1P02452 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
COL1A1P02452 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 AC073130.3-201ENST00000624389 2278 ntBASIC22.94■■□□□ 1.26
COL1A1P02452 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.94■■□□□ 1.26
COL1A1P02452 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.94■■□□□ 1.26
COL1A1P02452 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A1P02452 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL1A1P02452 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL1A1P02452 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.93■■□□□ 1.26
COL1A1P02452 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL1A1P02452 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL1A1P02452 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.93■■□□□ 1.26
COL1A1P02452 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.93■■□□□ 1.26
COL1A1P02452 PP7080-204ENST00000510714 601 ntTSL 3 BASIC22.93■■□□□ 1.26
COL1A1P02452 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC22.93■■□□□ 1.26
COL1A1P02452 KRT8P3-201ENST00000519669 1449 ntBASIC22.93■■□□□ 1.26
COL1A1P02452 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
COL1A1P02452 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL1A1P02452 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
COL1A1P02452 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.92■■□□□ 1.26
COL1A1P02452 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.92■■□□□ 1.26
COL1A1P02452 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
COL1A1P02452 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL1A1P02452 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.92■■□□□ 1.26
COL1A1P02452 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.92■■□□□ 1.26
COL1A1P02452 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.92■■□□□ 1.26
COL1A1P02452 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC22.92■■□□□ 1.26
COL1A1P02452 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms