Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CLSTN1O94985 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.06■□□□□ 0.96
CLSTN1O94985 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.06■□□□□ 0.96
CLSTN1O94985 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.06■□□□□ 0.96
CLSTN1O94985 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.05■□□□□ 0.96
CLSTN1O94985 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CLSTN1O94985 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.05■□□□□ 0.96
CLSTN1O94985 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.05■□□□□ 0.96
CLSTN1O94985 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.05■□□□□ 0.96
CLSTN1O94985 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.05■□□□□ 0.96
CLSTN1O94985 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.05■□□□□ 0.96
CLSTN1O94985 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.05■□□□□ 0.96
CLSTN1O94985 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.05■□□□□ 0.96
CLSTN1O94985 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.05■□□□□ 0.96
CLSTN1O94985 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CLSTN1O94985 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.05■□□□□ 0.96
CLSTN1O94985 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CLSTN1O94985 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.05■□□□□ 0.96
CLSTN1O94985 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.05■□□□□ 0.96
CLSTN1O94985 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLSTN1O94985 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.04■□□□□ 0.96
CLSTN1O94985 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
CLSTN1O94985 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLSTN1O94985 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.04■□□□□ 0.96
CLSTN1O94985 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLSTN1O94985 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.04■□□□□ 0.96
CLSTN1O94985 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.04■□□□□ 0.96
CLSTN1O94985 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.04■□□□□ 0.96
CLSTN1O94985 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLSTN1O94985 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLSTN1O94985 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLSTN1O94985 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.03■□□□□ 0.96
CLSTN1O94985 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLSTN1O94985 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.03■□□□□ 0.96
CLSTN1O94985 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CLSTN1O94985 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLSTN1O94985 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CLSTN1O94985 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLSTN1O94985 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CLSTN1O94985 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CLSTN1O94985 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.02■□□□□ 0.96
CLSTN1O94985 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.02■□□□□ 0.96
CLSTN1O94985 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLSTN1O94985 GCSHP5-201ENST00000443090 522 ntBASIC21.02■□□□□ 0.96
CLSTN1O94985 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.02■□□□□ 0.96
CLSTN1O94985 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.02■□□□□ 0.96
CLSTN1O94985 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLSTN1O94985 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.02■□□□□ 0.96
CLSTN1O94985 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLSTN1O94985 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLSTN1O94985 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLSTN1O94985 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms