Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPXO76031 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPXO76031 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPXO76031 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLPXO76031 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.27■□□□□ 0.36
CLPXO76031 POU5F1P4-201ENST00000413175 1085 ntBASIC17.27■□□□□ 0.36
CLPXO76031 AC006015.1-201ENST00000429970 570 ntBASIC17.27■□□□□ 0.36
CLPXO76031 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CLPXO76031 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.27■□□□□ 0.36
CLPXO76031 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPXO76031 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.27■□□□□ 0.36
CLPXO76031 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.27■□□□□ 0.36
CLPXO76031 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLPXO76031 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.27■□□□□ 0.36
CLPXO76031 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPXO76031 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLPXO76031 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPXO76031 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CLPXO76031 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CLPXO76031 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPXO76031 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLPXO76031 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPXO76031 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CLPXO76031 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.27■□□□□ 0.35
CLPXO76031 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPXO76031 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPXO76031 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPXO76031 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CLPXO76031 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPXO76031 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLPXO76031 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPXO76031 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPXO76031 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLPXO76031 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.26■□□□□ 0.35
CLPXO76031 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CLPXO76031 KRT19P1-201ENST00000405746 1186 ntBASIC17.26■□□□□ 0.35
CLPXO76031 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPXO76031 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPXO76031 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.26■□□□□ 0.35
CLPXO76031 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPXO76031 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPXO76031 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
CLPXO76031 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.26■□□□□ 0.35
CLPXO76031 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPXO76031 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 GNAS-203ENST00000306120 1878 ntBASIC17.25■□□□□ 0.35
CLPXO76031 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLPXO76031 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.25■□□□□ 0.35
CLPXO76031 AC245052.3-201ENST00000450182 901 ntBASIC17.25■□□□□ 0.35
CLPXO76031 AC080038.1-201ENST00000611274 1154 ntBASIC17.25■□□□□ 0.35
CLPXO76031 AC120498.10-201ENST00000621827 505 ntBASIC17.25■□□□□ 0.35
CLPXO76031 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.25■□□□□ 0.35
CLPXO76031 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLPXO76031 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.25■□□□□ 0.35
CLPXO76031 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.25■□□□□ 0.35
CLPXO76031 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLPXO76031 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLPXO76031 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPXO76031 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.24■□□□□ 0.35
CLPXO76031 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms