Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFPL1O75677 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFPL1O75677 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RFPL1O75677 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
RFPL1O75677 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RFPL1O75677 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.11■□□□□ 0.65
RFPL1O75677 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFPL1O75677 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RFPL1O75677 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.11■□□□□ 0.65
RFPL1O75677 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.11■□□□□ 0.65
RFPL1O75677 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.11■□□□□ 0.65
RFPL1O75677 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.11■□□□□ 0.65
RFPL1O75677 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.11■□□□□ 0.65
RFPL1O75677 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.11■□□□□ 0.65
RFPL1O75677 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.11■□□□□ 0.65
RFPL1O75677 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
RFPL1O75677 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.11■□□□□ 0.65
RFPL1O75677 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RFPL1O75677 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
RFPL1O75677 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.11■□□□□ 0.65
RFPL1O75677 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFPL1O75677 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.1■□□□□ 0.65
RFPL1O75677 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.1■□□□□ 0.65
RFPL1O75677 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFPL1O75677 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.1■□□□□ 0.65
RFPL1O75677 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RFPL1O75677 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 KRT18P16-201ENST00000510337 1294 ntBASIC19.1■□□□□ 0.65
RFPL1O75677 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.1■□□□□ 0.65
RFPL1O75677 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.1■□□□□ 0.65
RFPL1O75677 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.1■□□□□ 0.65
RFPL1O75677 AC073912.3-201ENST00000624414 853 ntBASIC19.1■□□□□ 0.65
RFPL1O75677 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFPL1O75677 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.1■□□□□ 0.65
RFPL1O75677 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.1■□□□□ 0.65
RFPL1O75677 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RFPL1O75677 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RFPL1O75677 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFPL1O75677 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.1■□□□□ 0.65
RFPL1O75677 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RFPL1O75677 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFPL1O75677 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
RFPL1O75677 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RFPL1O75677 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.09■□□□□ 0.65
RFPL1O75677 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.09■□□□□ 0.65
RFPL1O75677 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RFPL1O75677 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.09■□□□□ 0.65
RFPL1O75677 AL121906.2-201ENST00000621597 723 ntBASIC19.09■□□□□ 0.65
RFPL1O75677 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 AL354751.1-201ENST00000412768 1863 ntBASIC19.09■□□□□ 0.65
RFPL1O75677 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.09■□□□□ 0.65
RFPL1O75677 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.09■□□□□ 0.65
RFPL1O75677 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFPL1O75677 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.09■□□□□ 0.65
RFPL1O75677 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFPL1O75677 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFPL1O75677 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms