Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNRNP200O75643 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRNP200O75643 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRNP200O75643 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNRNP200O75643 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.21■□□□□ 0.51
SNRNP200O75643 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.21■□□□□ 0.51
SNRNP200O75643 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
SNRNP200O75643 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SNRNP200O75643 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNRNP200O75643 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRNP200O75643 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SNRNP200O75643 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.21■□□□□ 0.5
SNRNP200O75643 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRNP200O75643 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SNRNP200O75643 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SNRNP200O75643 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.2■□□□□ 0.5
SNRNP200O75643 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.2■□□□□ 0.5
SNRNP200O75643 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.2■□□□□ 0.5
SNRNP200O75643 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRNP200O75643 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SNRNP200O75643 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNRNP200O75643 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRNP200O75643 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.2■□□□□ 0.5
SNRNP200O75643 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.2■□□□□ 0.5
SNRNP200O75643 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRNP200O75643 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SNRNP200O75643 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SNRNP200O75643 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.19■□□□□ 0.5
SNRNP200O75643 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.19■□□□□ 0.5
SNRNP200O75643 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNRNP200O75643 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.19■□□□□ 0.5
SNRNP200O75643 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SNRNP200O75643 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.19■□□□□ 0.5
SNRNP200O75643 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SNRNP200O75643 AC010653.2-201ENST00000623505 997 ntBASIC18.19■□□□□ 0.5
SNRNP200O75643 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.19■□□□□ 0.5
SNRNP200O75643 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNRNP200O75643 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.19■□□□□ 0.5
SNRNP200O75643 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNRNP200O75643 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNRNP200O75643 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.19■□□□□ 0.5
SNRNP200O75643 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNRNP200O75643 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SNRNP200O75643 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNRNP200O75643 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SNRNP200O75643 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNRNP200O75643 GPAT2P1-201ENST00000444924 1672 ntBASIC18.19■□□□□ 0.5
SNRNP200O75643 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNRNP200O75643 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.19■□□□□ 0.5
SNRNP200O75643 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.19■□□□□ 0.5
SNRNP200O75643 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SNRNP200O75643 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SNRNP200O75643 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.18■□□□□ 0.5
SNRNP200O75643 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.18■□□□□ 0.5
SNRNP200O75643 CCR12P-201ENST00000446203 998 ntBASIC18.18■□□□□ 0.5
SNRNP200O75643 AL359075.1-203ENST00000462729 1002 ntBASIC18.18■□□□□ 0.5
SNRNP200O75643 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.18■□□□□ 0.5
SNRNP200O75643 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.18■□□□□ 0.5
SNRNP200O75643 AC083849.1-201ENST00000615227 514 ntBASIC18.18■□□□□ 0.5
SNRNP200O75643 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.18■□□□□ 0.5
SNRNP200O75643 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.18■□□□□ 0.5
SNRNP200O75643 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SNRNP200O75643 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SNRNP200O75643 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNRNP200O75643 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.17■□□□□ 0.5
SNRNP200O75643 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP200O75643 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP200O75643 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP200O75643 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.17■□□□□ 0.5
SNRNP200O75643 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP200O75643 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.17■□□□□ 0.5
SNRNP200O75643 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP200O75643 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP200O75643 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP200O75643 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP200O75643 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
SNRNP200O75643 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms