Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN11O75508 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN11O75508 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLDN11O75508 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN11O75508 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN11O75508 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.46■□□□□ 0.71
CLDN11O75508 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN11O75508 AP003041.3-201ENST00000527151 707 ntBASIC19.46■□□□□ 0.71
CLDN11O75508 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN11O75508 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 AC116562.4-201ENST00000641316 2276 ntBASIC19.46■□□□□ 0.71
CLDN11O75508 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CLDN11O75508 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN11O75508 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN11O75508 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN11O75508 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLDN11O75508 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN11O75508 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN11O75508 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN11O75508 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN11O75508 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLDN11O75508 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLDN11O75508 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN11O75508 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.45■□□□□ 0.7
CLDN11O75508 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN11O75508 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN11O75508 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN11O75508 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN11O75508 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN11O75508 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLDN11O75508 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLDN11O75508 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN11O75508 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CLDN11O75508 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN11O75508 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CLDN11O75508 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN11O75508 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN11O75508 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.44■□□□□ 0.7
CLDN11O75508 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN11O75508 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN11O75508 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CLDN11O75508 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CLDN11O75508 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLDN11O75508 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN11O75508 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN11O75508 AL137013.1-201ENST00000432946 1228 ntBASIC19.44■□□□□ 0.7
CLDN11O75508 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN11O75508 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CLDN11O75508 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN11O75508 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLDN11O75508 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CLDN11O75508 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN11O75508 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CLDN11O75508 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLDN11O75508 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN11O75508 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN11O75508 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN11O75508 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN11O75508 AL512604.3-201ENST00000569583 964 ntBASIC19.43■□□□□ 0.7
CLDN11O75508 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CLDN11O75508 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN11O75508 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN11O75508 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN11O75508 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLDN11O75508 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN11O75508 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN11O75508 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLDN11O75508 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN11O75508 TERF1P1-201ENST00000311003 1181 ntBASIC19.42■□□□□ 0.7
CLDN11O75508 AC005521.1-201ENST00000393351 872 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms