Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
FOXD2O60548 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXD2O60548 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXD2O60548 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FOXD2O60548 STARP1-201ENST00000397973 869 ntBASIC19.15■□□□□ 0.66
FOXD2O60548 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXD2O60548 AC008040.2-201ENST00000461049 708 ntBASIC19.15■□□□□ 0.66
FOXD2O60548 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXD2O60548 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.15■□□□□ 0.66
FOXD2O60548 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXD2O60548 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
FOXD2O60548 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXD2O60548 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXD2O60548 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXD2O60548 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXD2O60548 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXD2O60548 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXD2O60548 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXD2O60548 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXD2O60548 AC112907.3-201ENST00000577781 2400 ntBASIC19.14■□□□□ 0.66
FOXD2O60548 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
FOXD2O60548 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
FOXD2O60548 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 AP005212.1-201ENST00000581547 1997 ntBASIC19.14■□□□□ 0.65
FOXD2O60548 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXD2O60548 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXD2O60548 AC112907.2-201ENST00000448639 330 ntBASIC19.14■□□□□ 0.65
FOXD2O60548 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXD2O60548 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXD2O60548 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXD2O60548 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXD2O60548 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXD2O60548 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXD2O60548 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 KRT8P10-201ENST00000450021 1447 ntBASIC19.14■□□□□ 0.65
FOXD2O60548 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXD2O60548 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXD2O60548 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXD2O60548 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXD2O60548 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXD2O60548 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXD2O60548 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXD2O60548 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXD2O60548 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXD2O60548 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXD2O60548 CKBP1-201ENST00000565489 1086 ntBASIC19.13■□□□□ 0.65
FOXD2O60548 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXD2O60548 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.13■□□□□ 0.65
FOXD2O60548 HLA-A-209ENST00000638375 975 ntBASIC19.13■□□□□ 0.65
FOXD2O60548 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXD2O60548 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXD2O60548 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXD2O60548 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
FOXD2O60548 AC018445.3-201ENST00000624177 1945 ntBASIC19.13■□□□□ 0.65
FOXD2O60548 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXD2O60548 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXD2O60548 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXD2O60548 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
FOXD2O60548 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXD2O60548 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXD2O60548 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXD2O60548 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.12■□□□□ 0.65
FOXD2O60548 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXD2O60548 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXD2O60548 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXD2O60548 KRT16P6-202ENST00000425692 1426 ntBASIC19.12■□□□□ 0.65
FOXD2O60548 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FOXD2O60548 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXD2O60548 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXD2O60548 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXD2O60548 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.12■□□□□ 0.65
FOXD2O60548 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
FOXD2O60548 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXD2O60548 AC023511.2-201ENST00000618803 211 ntBASIC19.12■□□□□ 0.65
FOXD2O60548 AC012313.10-201ENST00000623509 926 ntBASIC19.12■□□□□ 0.65
FOXD2O60548 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXD2O60548 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXD2O60548 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
FOXD2O60548 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FOXD2O60548 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXD2O60548 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
FOXD2O60548 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXD2O60548 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXD2O60548 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXD2O60548 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXD2O60548 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms