Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
ZIC3O60481 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.15■□□□□ 0.34
ZIC3O60481 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.15■□□□□ 0.34
ZIC3O60481 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.15■□□□□ 0.34
ZIC3O60481 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.15■□□□□ 0.34
ZIC3O60481 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.15■□□□□ 0.34
ZIC3O60481 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
ZIC3O60481 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.15■□□□□ 0.34
ZIC3O60481 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ZIC3O60481 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZIC3O60481 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ZIC3O60481 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZIC3O60481 KRT8P3-201ENST00000519669 1449 ntBASIC17.14■□□□□ 0.33
ZIC3O60481 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.14■□□□□ 0.33
ZIC3O60481 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZIC3O60481 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZIC3O60481 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.14■□□□□ 0.33
ZIC3O60481 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZIC3O60481 AC005521.1-201ENST00000393351 872 ntBASIC17.14■□□□□ 0.33
ZIC3O60481 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ZIC3O60481 RCN1P1-201ENST00000400413 996 ntBASIC17.14■□□□□ 0.33
ZIC3O60481 AC113347.1-201ENST00000413321 391 ntBASIC17.14■□□□□ 0.33
ZIC3O60481 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.14■□□□□ 0.33
ZIC3O60481 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZIC3O60481 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.14■□□□□ 0.33
ZIC3O60481 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ZIC3O60481 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ZIC3O60481 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZIC3O60481 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ZIC3O60481 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZIC3O60481 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZIC3O60481 AC073508.3-201ENST00000619697 1419 ntBASIC17.13■□□□□ 0.33
ZIC3O60481 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.13■□□□□ 0.33
ZIC3O60481 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 HMGA1P5-201ENST00000412453 271 ntBASIC17.13■□□□□ 0.33
ZIC3O60481 AC010203.1-204ENST00000548782 407 ntBASIC17.13■□□□□ 0.33
ZIC3O60481 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.13■□□□□ 0.33
ZIC3O60481 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
ZIC3O60481 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.13■□□□□ 0.33
ZIC3O60481 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.13■□□□□ 0.33
ZIC3O60481 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZIC3O60481 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
ZIC3O60481 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.12■□□□□ 0.33
ZIC3O60481 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZIC3O60481 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.12■□□□□ 0.33
ZIC3O60481 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.12■□□□□ 0.33
ZIC3O60481 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.12■□□□□ 0.33
ZIC3O60481 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.12■□□□□ 0.33
ZIC3O60481 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZIC3O60481 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.12■□□□□ 0.33
ZIC3O60481 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.12■□□□□ 0.33
ZIC3O60481 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.12■□□□□ 0.33
ZIC3O60481 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
ZIC3O60481 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZIC3O60481 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZIC3O60481 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
ZIC3O60481 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZIC3O60481 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ZIC3O60481 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ZIC3O60481 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.11■□□□□ 0.33
ZIC3O60481 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.11■□□□□ 0.33
ZIC3O60481 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms