Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL390955.1-201ENST00000428694 934 ntBASIC18.23■□□□□ 0.51
LCMT2O60294 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.23■□□□□ 0.51
LCMT2O60294 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.23■□□□□ 0.51
LCMT2O60294 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.23■□□□□ 0.51
LCMT2O60294 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
LCMT2O60294 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LCMT2O60294 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LCMT2O60294 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
LCMT2O60294 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.23■□□□□ 0.51
LCMT2O60294 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.23■□□□□ 0.51
LCMT2O60294 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LCMT2O60294 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LCMT2O60294 AC096733.2-201ENST00000609937 1394 ntBASIC18.22■□□□□ 0.51
LCMT2O60294 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
LCMT2O60294 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.22■□□□□ 0.51
LCMT2O60294 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.22■□□□□ 0.51
LCMT2O60294 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.22■□□□□ 0.51
LCMT2O60294 MFAP1P1-201ENST00000442257 1255 ntBASIC18.22■□□□□ 0.51
LCMT2O60294 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
LCMT2O60294 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
LCMT2O60294 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.22■□□□□ 0.51
LCMT2O60294 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCMT2O60294 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LCMT2O60294 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
LCMT2O60294 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.21■□□□□ 0.51
LCMT2O60294 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
LCMT2O60294 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCMT2O60294 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.21■□□□□ 0.51
LCMT2O60294 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LCMT2O60294 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.21■□□□□ 0.5
LCMT2O60294 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.2■□□□□ 0.5
LCMT2O60294 AP000974.1-201ENST00000623909 2387 ntBASIC18.2■□□□□ 0.5
LCMT2O60294 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LCMT2O60294 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.2■□□□□ 0.5
LCMT2O60294 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LCMT2O60294 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.2■□□□□ 0.5
LCMT2O60294 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.2■□□□□ 0.5
LCMT2O60294 MIR1238-201ENST00000408483 83 ntBASIC18.2■□□□□ 0.5
LCMT2O60294 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 FITM1-202ENST00000559294 800 ntBASIC18.2■□□□□ 0.5
LCMT2O60294 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.2■□□□□ 0.5
LCMT2O60294 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 AC087289.5-201ENST00000586076 3175 ntBASIC18.2■□□□□ 0.5
LCMT2O60294 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.2■□□□□ 0.5
LCMT2O60294 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.2■□□□□ 0.5
LCMT2O60294 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.2■□□□□ 0.5
LCMT2O60294 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCMT2O60294 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.2■□□□□ 0.5
LCMT2O60294 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.19■□□□□ 0.5
LCMT2O60294 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LCMT2O60294 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LCMT2O60294 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.19■□□□□ 0.5
LCMT2O60294 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.19■□□□□ 0.5
LCMT2O60294 KRT8P9-201ENST00000558927 1449 ntBASIC18.19■□□□□ 0.5
LCMT2O60294 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms