Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.89■□□□□ 0.45
RRP8O43159 AC092720.2-201ENST00000602388 1665 ntBASIC17.89■□□□□ 0.45
RRP8O43159 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.89■□□□□ 0.45
RRP8O43159 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RRP8O43159 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RRP8O43159 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 AL157384.1-201ENST00000445995 2473 ntBASIC17.88■□□□□ 0.45
RRP8O43159 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.88■□□□□ 0.45
RRP8O43159 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.88■□□□□ 0.45
RRP8O43159 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 AC079781.3-201ENST00000449110 356 ntBASIC17.88■□□□□ 0.45
RRP8O43159 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 AC106795.1-205ENST00000512851 1056 ntBASIC17.88■□□□□ 0.45
RRP8O43159 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.88■□□□□ 0.45
RRP8O43159 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.88■□□□□ 0.45
RRP8O43159 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.88■□□□□ 0.45
RRP8O43159 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.88■□□□□ 0.45
RRP8O43159 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.88■□□□□ 0.45
RRP8O43159 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
RRP8O43159 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.88■□□□□ 0.45
RRP8O43159 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RRP8O43159 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RRP8O43159 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.88■□□□□ 0.45
RRP8O43159 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.88■□□□□ 0.45
RRP8O43159 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 LINC00265-3P-201ENST00000447588 903 ntBASIC17.87■□□□□ 0.45
RRP8O43159 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.87■□□□□ 0.45
RRP8O43159 AP002469.2-201ENST00000531724 424 ntBASIC17.87■□□□□ 0.45
RRP8O43159 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.87■□□□□ 0.45
RRP8O43159 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.87■□□□□ 0.45
RRP8O43159 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.87■□□□□ 0.45
RRP8O43159 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.87■□□□□ 0.45
RRP8O43159 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RRP8O43159 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 KRT8P11-201ENST00000409686 1436 ntBASIC17.87■□□□□ 0.45
RRP8O43159 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.87■□□□□ 0.45
RRP8O43159 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RRP8O43159 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RRP8O43159 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 AC093525.10-201ENST00000625130 1569 ntBASIC17.87■□□□□ 0.45
RRP8O43159 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RRP8O43159 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.87■□□□□ 0.45
RRP8O43159 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.86■□□□□ 0.45
RRP8O43159 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.86■□□□□ 0.45
RRP8O43159 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 KRT18P31-201ENST00000506277 1292 ntBASIC17.86■□□□□ 0.45
RRP8O43159 FOSL1P1-201ENST00000511041 816 ntBASIC17.86■□□□□ 0.45
RRP8O43159 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 AC120114.3-201ENST00000611923 658 ntBASIC17.86■□□□□ 0.45
RRP8O43159 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.86■□□□□ 0.45
RRP8O43159 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RRP8O43159 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RRP8O43159 PLK5-205ENST00000642079 1969 ntBASIC17.86■□□□□ 0.45
RRP8O43159 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.86■□□□□ 0.45
RRP8O43159 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RRP8O43159 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RRP8O43159 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.85■□□□□ 0.45
RRP8O43159 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.85■□□□□ 0.45
RRP8O43159 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms