Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATP2A1O14983 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATP2A1O14983 IER3-202ENST00000376377 1350 ntBASIC21.81■■□□□ 1.08
ATP2A1O14983 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ATP2A1O14983 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP2A1O14983 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP2A1O14983 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP2A1O14983 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP2A1O14983 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP2A1O14983 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP2A1O14983 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP2A1O14983 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ATP2A1O14983 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2A1O14983 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP2A1O14983 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ATP2A1O14983 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ATP2A1O14983 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2A1O14983 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP2A1O14983 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2A1O14983 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2A1O14983 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.8■■□□□ 1.08
ATP2A1O14983 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2A1O14983 AC112907.2-201ENST00000448639 330 ntBASIC21.8■■□□□ 1.08
ATP2A1O14983 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.8■■□□□ 1.08
ATP2A1O14983 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.8■■□□□ 1.08
ATP2A1O14983 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2A1O14983 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2A1O14983 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP2A1O14983 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2A1O14983 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
ATP2A1O14983 GPAT2P1-201ENST00000444924 1672 ntBASIC21.79■■□□□ 1.08
ATP2A1O14983 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP2A1O14983 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ATP2A1O14983 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ATP2A1O14983 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP2A1O14983 AC083849.1-201ENST00000615227 514 ntBASIC21.79■■□□□ 1.08
ATP2A1O14983 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP2A1O14983 AC112907.3-201ENST00000577781 2400 ntBASIC21.79■■□□□ 1.08
ATP2A1O14983 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP2A1O14983 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP2A1O14983 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2A1O14983 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP2A1O14983 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP2A1O14983 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP2A1O14983 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP2A1O14983 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 LINC01521-201ENST00000504184 1943 ntBASIC21.78■■□□□ 1.08
ATP2A1O14983 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
ATP2A1O14983 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ATP2A1O14983 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.78■■□□□ 1.08
ATP2A1O14983 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP2A1O14983 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.78■■□□□ 1.08
ATP2A1O14983 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ATP2A1O14983 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP2A1O14983 KRT8P3-201ENST00000519669 1449 ntBASIC21.78■■□□□ 1.08
ATP2A1O14983 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP2A1O14983 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATP2A1O14983 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATP2A1O14983 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2A1O14983 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP2A1O14983 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2A1O14983 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2A1O14983 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2A1O14983 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2A1O14983 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP2A1O14983 AL023284.2-201ENST00000405850 579 ntBASIC21.77■■□□□ 1.08
ATP2A1O14983 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP2A1O14983 ZNF444P1-201ENST00000559497 298 ntBASIC21.77■■□□□ 1.08
ATP2A1O14983 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2A1O14983 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2A1O14983 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2A1O14983 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2A1O14983 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.77■■□□□ 1.07
ATP2A1O14983 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATP2A1O14983 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP2A1O14983 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
ATP2A1O14983 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms