Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 AL161938.1-201ENST00000569833 2180 ntBASIC17.8■□□□□ 0.44
AP3D1O14617 KRT8P8-201ENST00000434750 1448 ntBASIC17.8■□□□□ 0.44
AP3D1O14617 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
AP3D1O14617 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.79■□□□□ 0.44
AP3D1O14617 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
AP3D1O14617 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3D1O14617 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP3D1O14617 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3D1O14617 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
AP3D1O14617 AC026366.1-201ENST00000488803 879 ntBASIC17.79■□□□□ 0.44
AP3D1O14617 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.79■□□□□ 0.44
AP3D1O14617 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.79■□□□□ 0.44
AP3D1O14617 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.79■□□□□ 0.44
AP3D1O14617 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
AP3D1O14617 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3D1O14617 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3D1O14617 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3D1O14617 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.78■□□□□ 0.44
AP3D1O14617 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
AP3D1O14617 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
AP3D1O14617 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3D1O14617 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.78■□□□□ 0.44
AP3D1O14617 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP3D1O14617 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.78■□□□□ 0.44
AP3D1O14617 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP3D1O14617 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.78■□□□□ 0.44
AP3D1O14617 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.78■□□□□ 0.44
AP3D1O14617 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.78■□□□□ 0.44
AP3D1O14617 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.78■□□□□ 0.44
AP3D1O14617 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3D1O14617 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
AP3D1O14617 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP3D1O14617 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3D1O14617 HTR7P1-202ENST00000624664 4411 ntBASIC17.78■□□□□ 0.44
AP3D1O14617 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.77■□□□□ 0.44
AP3D1O14617 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.77■□□□□ 0.44
AP3D1O14617 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.77■□□□□ 0.44
AP3D1O14617 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
AP3D1O14617 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.77■□□□□ 0.44
AP3D1O14617 KRT18P16-201ENST00000510337 1294 ntBASIC17.77■□□□□ 0.44
AP3D1O14617 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.77■□□□□ 0.44
AP3D1O14617 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.77■□□□□ 0.44
AP3D1O14617 AC069544.1-201ENST00000609399 999 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms