Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM38O00635 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM38O00635 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM38O00635 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TRIM38O00635 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM38O00635 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM38O00635 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM38O00635 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM38O00635 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
TRIM38O00635 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM38O00635 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM38O00635 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM38O00635 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM38O00635 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM38O00635 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM38O00635 TUBB8P6-201ENST00000436895 1288 ntBASIC19.14■□□□□ 0.65
TRIM38O00635 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM38O00635 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM38O00635 DUX4L26-201ENST00000489078 1255 ntBASIC19.14■□□□□ 0.65
TRIM38O00635 C2orf69P3-201ENST00000565542 1120 ntBASIC19.14■□□□□ 0.65
TRIM38O00635 AP005242.2-201ENST00000580065 1175 ntBASIC19.14■□□□□ 0.65
TRIM38O00635 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM38O00635 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TRIM38O00635 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM38O00635 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM38O00635 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRIM38O00635 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM38O00635 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TRIM38O00635 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM38O00635 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM38O00635 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM38O00635 ECEL1P2-202ENST00000465689 757 ntBASIC19.13■□□□□ 0.65
TRIM38O00635 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM38O00635 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 AC097488.1-201ENST00000507834 756 ntBASIC19.13■□□□□ 0.65
TRIM38O00635 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
TRIM38O00635 DGCR10-201ENST00000609839 495 ntBASIC19.13■□□□□ 0.65
TRIM38O00635 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.13■□□□□ 0.65
TRIM38O00635 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM38O00635 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM38O00635 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRIM38O00635 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM38O00635 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM38O00635 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM38O00635 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TRIM38O00635 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRIM38O00635 CRYGFP-201ENST00000418459 633 ntBASIC19.12■□□□□ 0.65
TRIM38O00635 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM38O00635 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TRIM38O00635 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM38O00635 NTF6B-201ENST00000591913 560 ntBASIC19.12■□□□□ 0.65
TRIM38O00635 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM38O00635 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM38O00635 AC131212.4-201ENST00000623606 975 ntBASIC19.12■□□□□ 0.65
TRIM38O00635 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM38O00635 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM38O00635 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM38O00635 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRIM38O00635 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
TRIM38O00635 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM38O00635 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRIM38O00635 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TRIM38O00635 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
TRIM38O00635 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM38O00635 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM38O00635 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms