Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.77■□□□□ 0.28
CCL21O00585 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.77■□□□□ 0.28
CCL21O00585 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL21O00585 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCL21O00585 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
CCL21O00585 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL21O00585 KRT8P10-201ENST00000450021 1447 ntBASIC16.77■□□□□ 0.27
CCL21O00585 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CCL21O00585 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCL21O00585 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL21O00585 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL21O00585 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.77■□□□□ 0.27
CCL21O00585 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.77■□□□□ 0.27
CCL21O00585 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.77■□□□□ 0.27
CCL21O00585 AL162741.1-201ENST00000565563 1558 ntBASIC16.77■□□□□ 0.27
CCL21O00585 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL21O00585 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.77■□□□□ 0.27
CCL21O00585 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCL21O00585 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL21O00585 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.76■□□□□ 0.27
CCL21O00585 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CCL21O00585 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 UNC93B7-201ENST00000509439 705 ntBASIC16.76■□□□□ 0.27
CCL21O00585 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.76■□□□□ 0.27
CCL21O00585 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL21O00585 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL21O00585 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.76■□□□□ 0.27
CCL21O00585 MIR3180-5-201ENST00000583743 153 ntBASIC16.76■□□□□ 0.27
CCL21O00585 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.76■□□□□ 0.27
CCL21O00585 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.76■□□□□ 0.27
CCL21O00585 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCL21O00585 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCL21O00585 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL21O00585 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 KRT18P1-202ENST00000452408 1331 ntBASIC16.75■□□□□ 0.27
CCL21O00585 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL21O00585 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL21O00585 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL21O00585 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL21O00585 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 CHCHD2P8-201ENST00000429873 447 ntBASIC16.75■□□□□ 0.27
CCL21O00585 NUS1P1-201ENST00000446295 882 ntBASIC16.75■□□□□ 0.27
CCL21O00585 KRT17P6-201ENST00000453795 1220 ntBASIC16.75■□□□□ 0.27
CCL21O00585 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.75■□□□□ 0.27
CCL21O00585 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.75■□□□□ 0.27
CCL21O00585 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL21O00585 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL21O00585 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL21O00585 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL21O00585 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCL21O00585 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCL21O00585 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCL21O00585 AC093525.10-201ENST00000625130 1569 ntBASIC16.74■□□□□ 0.27
CCL21O00585 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCL21O00585 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCL21O00585 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.74■□□□□ 0.27
CCL21O00585 IFNL4P1-201ENST00000607083 540 ntBASIC16.74■□□□□ 0.27
CCL21O00585 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCL21O00585 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL21O00585 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms