Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.43■■□□□ 1.02
DDX39AO00148 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX39AO00148 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX39AO00148 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
DDX39AO00148 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX39AO00148 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX39AO00148 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX39AO00148 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX39AO00148 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX39AO00148 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX39AO00148 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX39AO00148 HMGA1P5-201ENST00000412453 271 ntBASIC21.42■■□□□ 1.02
DDX39AO00148 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.42■■□□□ 1.02
DDX39AO00148 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.42■■□□□ 1.02
DDX39AO00148 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX39AO00148 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX39AO00148 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
DDX39AO00148 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
DDX39AO00148 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
DDX39AO00148 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX39AO00148 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.41■■□□□ 1.02
DDX39AO00148 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
DDX39AO00148 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX39AO00148 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
DDX39AO00148 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX39AO00148 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
DDX39AO00148 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.41■■□□□ 1.02
DDX39AO00148 CA15P1-201ENST00000481698 905 ntBASIC21.41■■□□□ 1.02
DDX39AO00148 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.41■■□□□ 1.02
DDX39AO00148 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
DDX39AO00148 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
DDX39AO00148 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX39AO00148 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
DDX39AO00148 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX39AO00148 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.4■■□□□ 1.02
DDX39AO00148 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
DDX39AO00148 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX39AO00148 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX39AO00148 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX39AO00148 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX39AO00148 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX39AO00148 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.4■■□□□ 1.02
DDX39AO00148 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX39AO00148 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX39AO00148 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.4■■□□□ 1.02
DDX39AO00148 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.4■■□□□ 1.02
DDX39AO00148 AC010653.2-201ENST00000623505 997 ntBASIC21.4■■□□□ 1.02
DDX39AO00148 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.4■■□□□ 1.02
DDX39AO00148 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX39AO00148 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX39AO00148 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
DDX39AO00148 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX39AO00148 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.02
DDX39AO00148 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX39AO00148 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX39AO00148 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DDX39AO00148 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX39AO00148 AL032819.2-201ENST00000624543 2162 ntBASIC21.39■■□□□ 1.01
DDX39AO00148 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.39■■□□□ 1.01
DDX39AO00148 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX39AO00148 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX39AO00148 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX39AO00148 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
DDX39AO00148 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
DDX39AO00148 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX39AO00148 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX39AO00148 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
DDX39AO00148 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX39AO00148 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX39AO00148 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX39AO00148 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX39AO00148 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX39AO00148 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX39AO00148 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
DDX39AO00148 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.38■■□□□ 1.01
DDX39AO00148 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX39AO00148 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX39AO00148 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
DDX39AO00148 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
DDX39AO00148 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX39AO00148 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms