Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TSPY5P-201ENST00000426936 936 ntBASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC125437.2-201ENST00000625180 2167 ntBASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.08■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.08■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FAM8A6P-201ENST00000407496 1135 ntBASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 NEK4P2-201ENST00000580004 1012 ntBASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC009947.2-201ENST00000444014 672 ntBASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 HOMER2P1-201ENST00000455653 964 ntBASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MIR4674-201ENST00000582457 87 ntBASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC011558.1-201ENST00000623459 338 ntBASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AL023973.1-201ENST00000624619 620 ntBASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms