Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN8A6NHC0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN8A6NHC0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 KRT8P41-201ENST00000533985 1514 ntBASIC19.31■□□□□ 0.68
CAPN8A6NHC0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 MESTP1-201ENST00000404287 994 ntBASIC19.31■□□□□ 0.68
CAPN8A6NHC0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.31■□□□□ 0.68
CAPN8A6NHC0 AC116562.2-201ENST00000507042 360 ntBASIC19.31■□□□□ 0.68
CAPN8A6NHC0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 AP003071.4-201ENST00000562276 1284 ntBASIC19.31■□□□□ 0.68
CAPN8A6NHC0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 AC012306.2-201ENST00000609350 630 ntBASIC19.31■□□□□ 0.68
CAPN8A6NHC0 MIR6786-201ENST00000616843 113 ntBASIC19.31■□□□□ 0.68
CAPN8A6NHC0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN8A6NHC0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.3■□□□□ 0.68
CAPN8A6NHC0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 AC004951.3-201ENST00000418645 1148 ntBASIC19.3■□□□□ 0.68
CAPN8A6NHC0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 REXO1L10P-201ENST00000615707 1290 ntBASIC19.3■□□□□ 0.68
CAPN8A6NHC0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.3■□□□□ 0.68
CAPN8A6NHC0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms