Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC091799.1-201ENST00000422823 811 ntBASIC15.05■□□□□ -0
RBFOX3A6NFN3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.05■□□□□ -0
RBFOX3A6NFN3 IGHV3-19-201ENST00000521488 291 ntBASIC15.05■□□□□ -0
RBFOX3A6NFN3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.05■□□□□ -0
RBFOX3A6NFN3 AC008406.3-201ENST00000620001 1374 ntBASIC15.05■□□□□ -0
RBFOX3A6NFN3 KRT8P20-201ENST00000423953 1409 ntBASIC15.05■□□□□ -0
RBFOX3A6NFN3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.05■□□□□ -0
RBFOX3A6NFN3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RBFOX3A6NFN3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RBFOX3A6NFN3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.05■□□□□ -0
RBFOX3A6NFN3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.05■□□□□ -0
RBFOX3A6NFN3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
RBFOX3A6NFN3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RBFOX3A6NFN3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RBFOX3A6NFN3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.05■□□□□ -0
RBFOX3A6NFN3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RBFOX3A6NFN3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.05■□□□□ -0
RBFOX3A6NFN3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RBFOX3A6NFN3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 BX842568.3-201ENST00000418104 571 ntBASIC15.04■□□□□ -0
RBFOX3A6NFN3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
RBFOX3A6NFN3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.04■□□□□ -0
RBFOX3A6NFN3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.03■□□□□ -0
RBFOX3A6NFN3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 AC138907.5-202ENST00000569484 235 ntBASIC15.03■□□□□ -0
RBFOX3A6NFN3 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 AL139384.1-201ENST00000612143 3047 ntBASIC15.03■□□□□ -0
RBFOX3A6NFN3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RBFOX3A6NFN3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.03■□□□□ -0
RBFOX3A6NFN3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
RBFOX3A6NFN3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.02■□□□□ -0
RBFOX3A6NFN3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.02■□□□□ -0
RBFOX3A6NFN3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.02■□□□□ -0
RBFOX3A6NFN3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
RBFOX3A6NFN3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.02■□□□□ -0
RBFOX3A6NFN3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.02■□□□□ -0
RBFOX3A6NFN3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.02■□□□□ -0
RBFOX3A6NFN3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 AC126544.1-201ENST00000580842 1059 ntBASIC15.02■□□□□ -0
RBFOX3A6NFN3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RBFOX3A6NFN3 AL358852.1-201ENST00000623174 1268 ntBASIC15.02■□□□□ -0
RBFOX3A6NFN3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms