Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC189A1A4V9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC189A1A4V9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC189A1A4V9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC189A1A4V9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.03■□□□□ 0.64
CCDC189A1A4V9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC189A1A4V9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 AC142086.2-201ENST00000569753 217 ntBASIC19.02■□□□□ 0.64
CCDC189A1A4V9 AC083880.1-201ENST00000608266 535 ntBASIC19.02■□□□□ 0.64
CCDC189A1A4V9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC189A1A4V9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC189A1A4V9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CCDC189A1A4V9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC189A1A4V9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC189A1A4V9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.02■□□□□ 0.63
CCDC189A1A4V9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC189A1A4V9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC189A1A4V9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 AL390961.4-201ENST00000623958 2535 ntBASIC19.01■□□□□ 0.63
CCDC189A1A4V9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 AC104417.2-201ENST00000562989 1793 ntBASIC19.01■□□□□ 0.63
CCDC189A1A4V9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC189A1A4V9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19■□□□□ 0.63
CCDC189A1A4V9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC189A1A4V9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
CCDC189A1A4V9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms