Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 GNAS-203ENST00000306120 1878 ntBASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 AC010141.2-201ENST00000452426 721 ntBASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 AC079140.4-201ENST00000507448 529 ntBASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 AC009299.2-201ENST00000482477 511 ntBASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 AC139713.2-201ENST00000641328 2723 ntBASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV13-2A0A0B4J235 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 AL355001.2-201ENST00000620617 1191 ntBASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 AC008764.6-201ENST00000595909 2069 ntBASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms