Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 AC125437.2-201ENST00000625180 2167 ntBASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.09■□□□□ 0.33
TRGV5A0A0B4J1U4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.08■□□□□ 0.33
TRGV5A0A0B4J1U4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.08■□□□□ 0.33
TRGV5A0A0B4J1U4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV5A0A0B4J1U4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.08■□□□□ 0.33
TRGV5A0A0B4J1U4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRGV5A0A0B4J1U4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV5A0A0B4J1U4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
TRGV5A0A0B4J1U4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 AC009947.2-201ENST00000444014 672 ntBASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 HOMER2P1-201ENST00000455653 964 ntBASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV5A0A0B4J1U4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 NEK4P2-201ENST00000580004 1012 ntBASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 MIR4674-201ENST00000582457 87 ntBASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.07■□□□□ 0.32
TRGV5A0A0B4J1U4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms