Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL445493.3-201ENST00000619568 477 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A5P29400 CENPCP1-201ENST00000533085 2578 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 HMGB1P5-201ENST00000255320 642 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
COL4A5P29400 RNU4-72P-201ENST00000410754 173 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.34□□□□□ -2.19
COL4A5P29400 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.34□□□□□ -2.19
COL4A5P29400 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.34□□□□□ -2.19
COL4A5P29400 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.34□□□□□ -2.19
COL4A5P29400 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.34□□□□□ -2.19
COL4A5P29400 USP12PX-201ENST00000432383 1057 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.34□□□□□ -2.19
COL4A5P29400 GXYLT1P1-201ENST00000446657 490 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
COL4A5P29400 RNU6-1132P-201ENST00000459214 107 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.34□□□□□ -2.19
COL4A5P29400 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
COL4A5P29400 RNU6-1102P-201ENST00000516149 96 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 SCARNA15.2-201ENST00000516409 127 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 RNU6-885P-201ENST00000516607 104 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 SCARNA11.3-201ENST00000517276 130 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.34□□□□□ -2.19
COL4A5P29400 AC087465.1-201ENST00000560574 245 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 AC090888.1-201ENST00000561335 1141 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 AC093510.2-201ENST00000562820 896 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 MIR4789-201ENST00000577469 82 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.34□□□□□ -2.19
COL4A5P29400 AL158211.4-201ENST00000606988 584 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 AP000238.1-201ENST00000608759 426 ntBASIC1.34□□□□□ -2.19
COL4A5P29400 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL4A5P29400 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
COL4A5P29400 MTND4P21-201ENST00000453886 1357 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 RNU6-270P-201ENST00000364131 105 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 RNU6-1300P-201ENST00000391046 108 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 MIR888-201ENST00000401186 77 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 SNORD23.1-201ENST00000408212 104 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC023141.4-201ENST00000412031 328 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 NDUFB4P7-201ENST00000423198 363 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 FAM204CP-201ENST00000424489 642 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL4A5P29400 ANKRD26P4-201ENST00000455755 950 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 ATG12P2-201ENST00000456830 416 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC008379.1-201ENST00000463655 464 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC091860.1-201ENST00000505723 432 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC113420.1-201ENST00000507903 571 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC112518.2-201ENST00000508565 425 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A5P29400 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.33□□□□□ -2.2
COL4A5P29400 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A5P29400 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A5P29400 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A5P29400 HMGN2P15-201ENST00000585707 270 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC091946.2-201ENST00000606105 291 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC008498.1-201ENST00000613012 531 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 AC022513.1-201ENST00000624512 117 ntBASIC1.33□□□□□ -2.2
COL4A5P29400 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
COL4A5P29400 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
COL4A5P29400 Y_RNA.25-201ENST00000362528 102 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RNU6-353P-201ENST00000364266 108 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RNU6-1078P-201ENST00000364522 103 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RNU6-140P-201ENST00000384566 108 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 MIR193B-201ENST00000384907 83 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 MIR506-201ENST00000384998 124 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 CYCSP33-201ENST00000414485 327 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 HMGB1P49-201ENST00000418882 569 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AIMP1P2-201ENST00000425294 312 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 MTCYBP15-201ENST00000433123 1127 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AL596276.1-201ENST00000434465 418 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 PGBD4P3-201ENST00000440731 581 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 FGF7P5-201ENST00000441829 291 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A5P29400 MTCYBP11-201ENST00000447254 1109 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RPL39P6-201ENST00000448289 150 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC079776.3-201ENST00000450665 370 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RNU7-140P-201ENST00000459546 60 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RPL30P12-201ENST00000474666 353 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC022447.3-201ENST00000506865 495 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 NDUFB4P2-201ENST00000509515 391 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 SNORA31.22-201ENST00000517204 135 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A5P29400 AC118942.1-201ENST00000529674 1035 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A5P29400 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A5P29400 MIR3973-201ENST00000579824 107 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A5P29400 AL671309.1-201ENST00000603750 544 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC026741.1-201ENST00000605892 482 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 HMGB1P24-202ENST00000615653 685 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC090132.2-201ENST00000615881 347 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A5P29400 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A5P29400 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A5P29400 OR5T3-201ENST00000303059 1023 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RNU6-216P-201ENST00000363282 104 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RNA5SP240-201ENST00000365355 128 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 SUGT1P1-201ENST00000379514 476 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 MIR514A1-201ENST00000385133 98 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AL355497.1-201ENST00000406262 551 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms