RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 CHIC1Q5VXU3 224 aa11.97□□□□□ -0.49
SCARNA15.2-201ENST00000516409 AEBP2Q6ZN18 517 aaPredicted RBP11.83□□□□□ -0.52
SCARNA15.2-201ENST00000516409 PHF23Q9BUL5 403 aaPredicted RBP10.61□□□□□ -0.71
SCARNA15.2-201ENST00000516409 PLPPR3Q6T4P5 718 aa9.91□□□□□ -0.82
SCARNA15.2-201ENST00000516409 SENP3Q9H4L4 574 aaPredicted RBP9.89□□□□□ -0.83
SCARNA15.2-201ENST00000516409 ADRA2BP18089 450 aa9.34□□□□□ -0.91
SCARNA15.2-201ENST00000516409 PPP6R1Q9UPN7 881 aa9.22□□□□□ -0.93
SCARNA15.2-201ENST00000516409 KCNA4P22459 653 aa9.18□□□□□ -0.94
SCARNA15.2-201ENST00000516409 FOXD1Q16676 465 aa9.17□□□□□ -0.94
SCARNA15.2-201ENST00000516409 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.94
SCARNA15.2-201ENST00000516409 PPP4R3CPQ6ZMV5 832 aa8.82□□□□□ -1
SCARNA15.2-201ENST00000516409 SLC4A1APQ9BWU0 796 aaKnown RBP8.81□□□□□ -1
SCARNA15.2-201ENST00000516409 CSRNP3Q8WYN3 585 aa8.78□□□□□ -1
SCARNA15.2-201ENST00000516409 PIAS4Q8N2W9 510 aaPredicted RBP8.77□□□□□ -1.01
SCARNA15.2-201ENST00000516409 NCBP3Q53F19 620 aaKnown RBP8.67□□□□□ -1.02
SCARNA15.2-201ENST00000516409 NPM3O75607 178 aaKnown RBP8.61□□□□□ -1.03
SCARNA15.2-201ENST00000516409 ZBTB22O15209 634 aa8.47□□□□□ -1.05
SCARNA15.2-201ENST00000516409 CNKSR2Q8WXI2 1034 aa8.44□□□□□ -1.06
SCARNA15.2-201ENST00000516409 SCAF1Q9H7N4 1312 aaKnown RBP8.35□□□□□ -1.07
SCARNA15.2-201ENST00000516409 FOXD4L1Q9NU39 408 aa8.28□□□□□ -1.08
SCARNA15.2-201ENST00000516409 MAPK8IP2Q13387 824 aaPredicted RBP8.25□□□□□ -1.09
SCARNA15.2-201ENST00000516409 MSH5O43196 834 aa8.21□□□□□ -1.1
SCARNA15.2-201ENST00000516409 DNAJC5BQ9UF47 199 aa8.18□□□□□ -1.1
SCARNA15.2-201ENST00000516409 RNF216Q9NWF9 866 aaPredicted RBP8.15□□□□□ -1.1
SCARNA15.2-201ENST00000516409 RTN4Q9NQC3 1192 aaKnown RBP8.06□□□□□ -1.12
SCARNA15.2-201ENST00000516409 SLC24A1O60721 1099 aa8.02□□□□□ -1.13
SCARNA15.2-201ENST00000516409 SLC4A2P04920 1241 aa8.02□□□□□ -1.13
SCARNA15.2-201ENST00000516409 AMER1Q5JTC6 1135 aaPredicted RBP8□□□□□ -1.13
SCARNA15.2-201ENST00000516409 HOXD11P31277 338 aaPredicted RBP7.99□□□□□ -1.13
SCARNA15.2-201ENST00000516409 DMRT2Q9Y5R5 561 aa7.98□□□□□ -1.13
SCARNA15.2-201ENST00000516409 FKBP8Q14318 412 aa7.93□□□□□ -1.14
SCARNA15.2-201ENST00000516409 MYCNP04198 464 aaPredicted RBP7.91□□□□□ -1.14
SCARNA15.2-201ENST00000516409 ATXN8OSP0DMR3 200 aa7.89□□□□□ -1.15
SCARNA15.2-201ENST00000516409 ATF5Q9Y2D1 282 aaPredicted RBP7.73□□□□□ -1.17
SCARNA15.2-201ENST00000516409 DCAF8L1A6NGE4 600 aa7.67□□□□□ -1.18
SCARNA15.2-201ENST00000516409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.65□□□□□ -1.18
SCARNA15.2-201ENST00000516409 SAMD1Q6SPF0 538 aaPredicted RBP7.59□□□□□ -1.19
SCARNA15.2-201ENST00000516409 U3KPZ7 1027 aaPredicted RBP7.59□□□□□ -1.19
SCARNA15.2-201ENST00000516409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.58□□□□□ -1.2
SCARNA15.2-201ENST00000516409 HNRNPUL2Q1KMD3 747 aaKnown RBP7.58□□□□□ -1.2
SCARNA15.2-201ENST00000516409 ZNF219Q9P2Y4 722 aaPredicted RBP7.5□□□□□ -1.21
SCARNA15.2-201ENST00000516409 SPDYE4A6NLX3 237 aa7.44□□□□□ -1.22
SCARNA15.2-201ENST00000516409 FBXO3Q9UK99 471 aa7.43□□□□□ -1.22
SCARNA15.2-201ENST00000516409 MKRN4PQ13434 485 aaPredicted RBP7.4□□□□□ -1.22
SCARNA15.2-201ENST00000516409 PLCB2Q00722 1185 aa7.39□□□□□ -1.23
SCARNA15.2-201ENST00000516409 VASPP50552 380 aaPredicted RBP7.38□□□□□ -1.23
SCARNA15.2-201ENST00000516409 APLP2Q06481 763 aa7.38□□□□□ -1.23
SCARNA15.2-201ENST00000516409 PROM2Q8N271 834 aa7.35□□□□□ -1.23
SCARNA15.2-201ENST00000516409 DCAF8L2P0C7V8 631 aa7.34□□□□□ -1.23
SCARNA15.2-201ENST00000516409 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
SCARNA15.2-201ENST00000516409 IFNLR1Q8IU57 520 aaPredicted RBP7.32□□□□□ -1.24
SCARNA15.2-201ENST00000516409 FBLN2P98095 1184 aa7.3□□□□□ -1.24
SCARNA15.2-201ENST00000516409 TRHP20396 242 aaPredicted RBP7.28□□□□□ -1.24
SCARNA15.2-201ENST00000516409 PKD2Q13563 968 aa7.26□□□□□ -1.25
SCARNA15.2-201ENST00000516409 SPINK5Q9NQ38 1064 aaPredicted RBP7.26□□□□□ -1.25
SCARNA15.2-201ENST00000516409 POLA2Q14181 598 aa7.25□□□□□ -1.25
SCARNA15.2-201ENST00000516409 CAPN15O75808 1086 aa7.2□□□□□ -1.26
SCARNA15.2-201ENST00000516409 PRKCSHP14314 528 aaPredicted RBP7.19□□□□□ -1.26
SCARNA15.2-201ENST00000516409 BCANQ96GW7 911 aa7.18□□□□□ -1.26
SCARNA15.2-201ENST00000516409 VSIG10Q8N0Z9 540 aa7.15□□□□□ -1.26
SCARNA15.2-201ENST00000516409 KLHL34Q8N239 644 aa7.15□□□□□ -1.26
SCARNA15.2-201ENST00000516409 ABCB7O75027 752 aa7.13□□□□□ -1.27
SCARNA15.2-201ENST00000516409 ECM2O94769 699 aaPredicted RBP7.13□□□□□ -1.27
SCARNA15.2-201ENST00000516409 SPOCK2Q92563 424 aa7.13□□□□□ -1.27
SCARNA15.2-201ENST00000516409 TAOK2Q9UL54 1235 aa7.12□□□□□ -1.27
SCARNA15.2-201ENST00000516409 NPM1P06748 294 aaKnown RBP eCLIP7.11□□□□□ -1.27
SCARNA15.2-201ENST00000516409 BBXQ8WY36 941 aaPredicted RBP7.11□□□□□ -1.27
SCARNA15.2-201ENST00000516409 RNF39Q9H2S5 420 aa7.11□□□□□ -1.27
SCARNA15.2-201ENST00000516409 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.11□□□□□ -1.27
SCARNA15.2-201ENST00000516409 PAXIP1Q6ZW49 1069 aaPredicted RBP7.1□□□□□ -1.27
SCARNA15.2-201ENST00000516409 CFAP44Q96MT7 982 aa7.1□□□□□ -1.27
SCARNA15.2-201ENST00000516409 KDM2AQ9Y2K7 1162 aa7.1□□□□□ -1.27
SCARNA15.2-201ENST00000516409 ZBTB12Q9Y330 459 aaPredicted RBP7.1□□□□□ -1.27
SCARNA15.2-201ENST00000516409 RGL2O15211 777 aa7.06□□□□□ -1.28
SCARNA15.2-201ENST00000516409 PLCD3Q8N3E9 789 aa7.05□□□□□ -1.28
SCARNA15.2-201ENST00000516409 ZNF692Q9BU19 519 aaPredicted RBP7.05□□□□□ -1.28
SCARNA15.2-201ENST00000516409 TPRNQ4KMQ1 711 aa7.04□□□□□ -1.28
SCARNA15.2-201ENST00000516409 STAG3Q9UJ98 1225 aa7.03□□□□□ -1.28
SCARNA15.2-201ENST00000516409 C1QBPQ07021 282 aaKnown RBP7.02□□□□□ -1.29
SCARNA15.2-201ENST00000516409 OSCARQ8IYS5 282 aa7.01□□□□□ -1.29
SCARNA15.2-201ENST00000516409 MIER1Q8N108 512 aa7□□□□□ -1.29
SCARNA15.2-201ENST00000516409 TSHZ2Q9NRE2 1034 aa7□□□□□ -1.29
SCARNA15.2-201ENST00000516409 PABPN1Q86U42 306 aaKnown RBP eCLIP6.99□□□□□ -1.29
SCARNA15.2-201ENST00000516409 SPRYD3Q8NCJ5 442 aa6.99□□□□□ -1.29
SCARNA15.2-201ENST00000516409 SSUH2Q9Y2M2 353 aa6.99□□□□□ -1.29
SCARNA15.2-201ENST00000516409 SPDYE2BA6NHP3 402 aa6.97□□□□□ -1.29
SCARNA15.2-201ENST00000516409 SPDYE6P0CI01 402 aa6.97□□□□□ -1.29
SCARNA15.2-201ENST00000516409 SPDYE2Q495Y8 402 aa6.97□□□□□ -1.29
SCARNA15.2-201ENST00000516409 CIZ1Q9ULV3 898 aaPredicted RBP6.97□□□□□ -1.29
SCARNA15.2-201ENST00000516409 CHGAP10645 457 aaKnown RBP6.96□□□□□ -1.3
SCARNA15.2-201ENST00000516409 DSG3P32926 999 aa6.95□□□□□ -1.3
SCARNA15.2-201ENST00000516409 PLEKHG5O94827 1062 aa6.88□□□□□ -1.31
SCARNA15.2-201ENST00000516409 ZBTB47Q9UFB7 747 aaPredicted RBP6.88□□□□□ -1.31
SCARNA15.2-201ENST00000516409 HS6ST3Q8IZP7 471 aa6.86□□□□□ -1.31
SCARNA15.2-201ENST00000516409 NBR1Q14596 966 aa6.85□□□□□ -1.31
SCARNA15.2-201ENST00000516409 RNF25Q96BH1 459 aaPredicted RBP6.85□□□□□ -1.31
SCARNA15.2-201ENST00000516409 DNAJC5Q9H3Z4 198 aa6.85□□□□□ -1.31
SCARNA15.2-201ENST00000516409 TRIM41Q8WV44 630 aa6.84□□□□□ -1.31
SCARNA15.2-201ENST00000516409 GSE1Q14687 1217 aa6.8□□□□□ -1.32
SCARNA15.2-201ENST00000516409 NKX1-1Q15270 411 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms