RNA–Protein interactions for RNA: ENST00000410754.1

RNU4-72P-201, Transcript of RNA, U4 small nuclear 72, pseudogene, humanhuman

BASIC

Gene RNU4-72P, Length 173 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-72P-201ENST00000410754 AEBP2Q6ZN18 517 aaPredicted RBP25.68■■□□□ 1.7
RNU4-72P-201ENST00000410754 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
RNU4-72P-201ENST00000410754 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
RNU4-72P-201ENST00000410754 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
RNU4-72P-201ENST00000410754 FOXD1Q16676 465 aa20.28■□□□□ 0.84
RNU4-72P-201ENST00000410754 PLPPR3Q6T4P5 718 aa20.11■□□□□ 0.81
RNU4-72P-201ENST00000410754 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
RNU4-72P-201ENST00000410754 ADRA2BP18089 450 aa19.35■□□□□ 0.69
RNU4-72P-201ENST00000410754 PIAS4Q8N2W9 510 aaPredicted RBP19.08■□□□□ 0.64
RNU4-72P-201ENST00000410754 MSH5O43196 834 aa18.77■□□□□ 0.6
RNU4-72P-201ENST00000410754 PPP4R3CPQ6ZMV5 832 aa17.71■□□□□ 0.43
RNU4-72P-201ENST00000410754 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
RNU4-72P-201ENST00000410754 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
RNU4-72P-201ENST00000410754 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
RNU4-72P-201ENST00000410754 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
RNU4-72P-201ENST00000410754 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
RNU4-72P-201ENST00000410754 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
RNU4-72P-201ENST00000410754 KCNA4P22459 653 aa17.09■□□□□ 0.33
RNU4-72P-201ENST00000410754 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
RNU4-72P-201ENST00000410754 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
RNU4-72P-201ENST00000410754 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
RNU4-72P-201ENST00000410754 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
RNU4-72P-201ENST00000410754 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
RNU4-72P-201ENST00000410754 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
RNU4-72P-201ENST00000410754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
RNU4-72P-201ENST00000410754 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
RNU4-72P-201ENST00000410754 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
RNU4-72P-201ENST00000410754 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
RNU4-72P-201ENST00000410754 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
RNU4-72P-201ENST00000410754 CACNB1Q02641 598 aaPredicted RBP15.82■□□□□ 0.12
RNU4-72P-201ENST00000410754 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
RNU4-72P-201ENST00000410754 ZBTB22O15209 634 aa15.71■□□□□ 0.11
RNU4-72P-201ENST00000410754 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
RNU4-72P-201ENST00000410754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
RNU4-72P-201ENST00000410754 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
RNU4-72P-201ENST00000410754 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
RNU4-72P-201ENST00000410754 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
RNU4-72P-201ENST00000410754 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
RNU4-72P-201ENST00000410754 APLP2Q06481 763 aa15.48■□□□□ 0.07
RNU4-72P-201ENST00000410754 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
RNU4-72P-201ENST00000410754 CAPN15O75808 1086 aa15.45■□□□□ 0.06
RNU4-72P-201ENST00000410754 TRHP20396 242 aaPredicted RBP15.34■□□□□ 0.05
RNU4-72P-201ENST00000410754 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
RNU4-72P-201ENST00000410754 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
RNU4-72P-201ENST00000410754 ATXN8OSP0DMR3 200 aa15.22■□□□□ 0.03
RNU4-72P-201ENST00000410754 DSG3P32926 999 aa15.22■□□□□ 0.03
RNU4-72P-201ENST00000410754 ABCB7O75027 752 aa15.15■□□□□ 0.02
RNU4-72P-201ENST00000410754 POLA2Q14181 598 aa15.04■□□□□ -0
RNU4-72P-201ENST00000410754 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
RNU4-72P-201ENST00000410754 FBLN2P98095 1184 aa14.63□□□□□ -0.07
RNU4-72P-201ENST00000410754 MKRN4PQ13434 485 aaPredicted RBP14.58□□□□□ -0.08
RNU4-72P-201ENST00000410754 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
RNU4-72P-201ENST00000410754 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
RNU4-72P-201ENST00000410754 SPDYE2BA6NHP3 402 aa14.34□□□□□ -0.11
RNU4-72P-201ENST00000410754 SPDYE6P0CI01 402 aa14.34□□□□□ -0.11
RNU4-72P-201ENST00000410754 SPDYE2Q495Y8 402 aa14.34□□□□□ -0.11
RNU4-72P-201ENST00000410754 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
RNU4-72P-201ENST00000410754 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
RNU4-72P-201ENST00000410754 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
RNU4-72P-201ENST00000410754 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
RNU4-72P-201ENST00000410754 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
RNU4-72P-201ENST00000410754 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
RNU4-72P-201ENST00000410754 PITPNM1O00562 1244 aa14□□□□□ -0.17
RNU4-72P-201ENST00000410754 FKBP8Q14318 412 aa13.99□□□□□ -0.17
RNU4-72P-201ENST00000410754 CHRDL2Q6WN34 429 aa13.99□□□□□ -0.17
RNU4-72P-201ENST00000410754 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
RNU4-72P-201ENST00000410754 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
RNU4-72P-201ENST00000410754 PROM2Q8N271 834 aa13.87□□□□□ -0.19
RNU4-72P-201ENST00000410754 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
RNU4-72P-201ENST00000410754 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
RNU4-72P-201ENST00000410754 POTEHQ6S545 545 aa13.78□□□□□ -0.2
RNU4-72P-201ENST00000410754 PIP4P2Q8N4L2 257 aa13.78□□□□□ -0.2
RNU4-72P-201ENST00000410754 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
RNU4-72P-201ENST00000410754 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
RNU4-72P-201ENST00000410754 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
RNU4-72P-201ENST00000410754 CREBZFQ9NS37 354 aa13.55□□□□□ -0.24
RNU4-72P-201ENST00000410754 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
RNU4-72P-201ENST00000410754 MIER1Q8N108 512 aa13.47□□□□□ -0.25
RNU4-72P-201ENST00000410754 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
RNU4-72P-201ENST00000410754 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
RNU4-72P-201ENST00000410754 HAX1O00165 279 aa13.4□□□□□ -0.26
RNU4-72P-201ENST00000410754 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
RNU4-72P-201ENST00000410754 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
RNU4-72P-201ENST00000410754 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
RNU4-72P-201ENST00000410754 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
RNU4-72P-201ENST00000410754 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
RNU4-72P-201ENST00000410754 EVX2Q03828 476 aa13.27□□□□□ -0.29
RNU4-72P-201ENST00000410754 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
RNU4-72P-201ENST00000410754 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
RNU4-72P-201ENST00000410754 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
RNU4-72P-201ENST00000410754 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
RNU4-72P-201ENST00000410754 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
RNU4-72P-201ENST00000410754 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
RNU4-72P-201ENST00000410754 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
RNU4-72P-201ENST00000410754 NUBP1P53384 320 aa13.12□□□□□ -0.31
RNU4-72P-201ENST00000410754 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
RNU4-72P-201ENST00000410754 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
RNU4-72P-201ENST00000410754 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
RNU4-72P-201ENST00000410754 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
RNU4-72P-201ENST00000410754 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms