Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RN7SL333P-201ENST00000476398 297 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL647P-201ENST00000485429 300 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL862P-201ENST00000491550 298 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 FTH1P23-201ENST00000492727 550 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL416P-201ENST00000494042 298 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SEM1P1-201ENST00000506694 209 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 LINC01085-203ENST00000511195 326 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SKP46-201ENST00000515942 234 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNA5SP20-201ENST00000515976 84 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SCARNA3-201ENST00000517097 143 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC139365.2-201ENST00000517972 253 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC018442.3-201ENST00000523025 183 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AP001880.2-201ENST00000538233 448 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC107016.1-201ENST00000550463 337 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL376P-201ENST00000578594 264 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR3689C-201ENST00000581239 72 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL25P-201ENST00000583862 260 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RPL23AP77-201ENST00000588044 463 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC093063.1-201ENST00000599317 363 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AL162713.1-201ENST00000604480 262 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 U1.22-201ENST00000605806 164 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AL451054.3-201ENST00000611115 776 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AL133351.5-201ENST00000612789 106 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC138904.2-201ENST00000614412 107 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR6723-201ENST00000621981 89 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC073308.1-201ENST00000623696 305 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR6841-201ENST00000637129 72 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC010325.3-201ENST00000641084 394 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ST5-237ENST00000530991 3396 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC104581.5-201ENST00000624171 7141 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC093591.2-201ENST00000565254 3843 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC009487.4-201ENST00000624969 3585 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 FAM35BP-202ENST00000497389 3337 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 AC092111.1-201ENST00000618256 3358 ntBASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 COL6A4P1-202ENST00000487147 4317 ntBASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
KRTAP4-4Q9BYR3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms