Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC093591.2-201ENST00000565254 3843 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 MIRLET7F1-201ENST00000362202 87 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU6-753P-201ENST00000363926 107 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU1-11P-201ENST00000383975 164 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU6-571P-201ENST00000384128 107 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR518E-201ENST00000385252 88 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU1-101P-201ENST00000391171 127 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 RPL18P10-201ENST00000425606 538 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 KRTAP9-11P-201ENST00000431013 525 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 MYL6P3-201ENST00000436904 432 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AL035417.1-201ENST00000442754 214 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 RPSAP64-201ENST00000451820 336 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC113208.1-201ENST00000497944 318 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC024995.1-201ENST00000523014 93 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 TXNP4-201ENST00000575018 310 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC103810.1-201ENST00000579873 453 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC090897.1-201ENST00000580909 226 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC079587.1-201ENST00000603846 277 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 SNX18P1Y-201ENST00000616231 511 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR6749-201ENST00000617008 69 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AL354718.1-201ENST00000619764 589 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC010325.3-201ENST00000641084 394 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 PCAT14-202ENST00000627127 3935 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 LRRC37A17P-201ENST00000570311 4693 ntBASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRTAP3-3Q9BYR6 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 MFSD8-233ENST00000641482 4860 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms