Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 CROCCP3-202ENST00000420820 1947 ntBASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX49Q9Y6V7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 AC104581.1-202ENST00000635932 2618 ntBASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 REXO1L12P-201ENST00000622156 912 ntBASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 PTBP1P-201ENST00000554374 1601 ntBASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX49Q9Y6V7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX49Q9Y6V7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 BX088651.1-201ENST00000540551 451 ntBASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX49Q9Y6V7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
DDX49Q9Y6V7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.83■■□□□ 1.24
DDX49Q9Y6V7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
DDX49Q9Y6V7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
DDX49Q9Y6V7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
DDX49Q9Y6V7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX49Q9Y6V7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX49Q9Y6V7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms