Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 TSPY21P-201ENST00000433481 731 ntBASIC21.78■■□□□ 1.08
CLIC4Q9Y696 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 AC133681.1-201ENST00000465482 601 ntBASIC21.78■■□□□ 1.08
CLIC4Q9Y696 Z85996.1-201ENST00000494644 937 ntBASIC21.78■■□□□ 1.08
CLIC4Q9Y696 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 Z98044.1-201ENST00000632503 1764 ntBASIC21.77■■□□□ 1.08
CLIC4Q9Y696 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLIC4Q9Y696 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLIC4Q9Y696 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.77■■□□□ 1.07
CLIC4Q9Y696 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 AC128676.1-201ENST00000454392 318 ntBASIC21.76■■□□□ 1.07
CLIC4Q9Y696 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 AC110285.5-201ENST00000611501 352 ntBASIC21.76■■□□□ 1.07
CLIC4Q9Y696 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC4Q9Y696 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC4Q9Y696 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 CD99P1-205ENST00000527459 561 ntBASIC21.74■■□□□ 1.07
CLIC4Q9Y696 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms