Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 KRT17P6-201ENST00000453795 1220 ntBASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 KRT8P26-201ENST00000534154 1276 ntBASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 AC079602.3-201ENST00000623931 403 ntBASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC2Q9Y5Z7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 SDHAP1-207ENST00000440850 2000 ntBASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 FAAHP1-202ENST00000446499 1238 ntBASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 MIR3180-5-201ENST00000583743 153 ntBASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 AC099778.1-201ENST00000568593 1911 ntBASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 KRT8P10-201ENST00000450021 1447 ntBASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HCFC2Q9Y5Z7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 PVRIG2P-201ENST00000435460 978 ntBASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 NUS1P1-201ENST00000446295 882 ntBASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 SEC1P-202ENST00000473944 940 ntBASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC2Q9Y5Z7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 HLA-F-220ENST00000434407 884 ntBASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 MCCD1P1-208ENST00000445732 328 ntBASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC2Q9Y5Z7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms