Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.03■□□□□ 0.48
AP4S1Q9Y587 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 UBE2DNL-204ENST00000602536 740 ntBASIC18.03■□□□□ 0.48
AP4S1Q9Y587 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 AC008764.6-201ENST00000595909 2069 ntBASIC18.03■□□□□ 0.48
AP4S1Q9Y587 AC139713.2-201ENST00000641328 2723 ntBASIC18.03■□□□□ 0.48
AP4S1Q9Y587 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP4S1Q9Y587 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.02■□□□□ 0.48
AP4S1Q9Y587 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4S1Q9Y587 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP4S1Q9Y587 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.47
AP4S1Q9Y587 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP4S1Q9Y587 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP4S1Q9Y587 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.02■□□□□ 0.47
AP4S1Q9Y587 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP4S1Q9Y587 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP4S1Q9Y587 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 KRT18P68-201ENST00000392293 1000 ntBASIC18.01■□□□□ 0.47
AP4S1Q9Y587 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 MYCNOS-205ENST00000641950 531 ntBASIC18.01■□□□□ 0.47
AP4S1Q9Y587 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 AC104417.2-201ENST00000562989 1793 ntBASIC18.01■□□□□ 0.47
AP4S1Q9Y587 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4S1Q9Y587 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
AP4S1Q9Y587 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4S1Q9Y587 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
AP4S1Q9Y587 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4S1Q9Y587 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18■□□□□ 0.47
AP4S1Q9Y587 AC073592.3-201ENST00000625118 1834 ntBASIC18■□□□□ 0.47
AP4S1Q9Y587 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4S1Q9Y587 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
AP4S1Q9Y587 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4S1Q9Y587 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18■□□□□ 0.47
AP4S1Q9Y587 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4S1Q9Y587 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
AP4S1Q9Y587 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18■□□□□ 0.47
AP4S1Q9Y587 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP4S1Q9Y587 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms