Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 CROCCP5-201ENST00000436658 830 ntBASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 AL121832.2-201ENST00000610979 668 ntBASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 IKBKGP1-201ENST00000612193 1073 ntBASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPS28Q9Y2Q9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 FEM1AP3-201ENST00000403722 1741 ntBASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 TUBB8P6-201ENST00000436895 1288 ntBASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 KRT18P16-201ENST00000510337 1294 ntBASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 AC083906.2-201ENST00000511578 360 ntBASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 AC005082.1-201ENST00000413042 2259 ntBASIC16.42■□□□□ 0.22
MRPS28Q9Y2Q9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 AC006970.2-201ENST00000450065 779 ntBASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms