Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AC087499.1-201ENST00000418141 1075 ntBASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 B3GAT3P1-201ENST00000471720 806 ntBASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AC011298.2-201ENST00000617989 482 ntBASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 AC104417.2-201ENST00000562989 1793 ntBASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPH3AQ9Y2J0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 UNC93B2-201ENST00000285383 730 ntBASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 AC004951.3-201ENST00000418645 1148 ntBASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 RBM17P1-201ENST00000453646 1190 ntBASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 Z85996.1-201ENST00000494644 937 ntBASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 AC116562.2-201ENST00000507042 360 ntBASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 AP000525.1-201ENST00000608286 694 ntBASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 SDHAP1-207ENST00000440850 2000 ntBASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.47■□□□□ 0.39
RPH3AQ9Y2J0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 MESTP1-201ENST00000404287 994 ntBASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 KRT18P35-201ENST00000510488 1269 ntBASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms