Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 AC008687.6-201ENST00000596318 630 ntBASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2BQ9UQN3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 FEM1AP3-201ENST00000403722 1741 ntBASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 AC005082.1-201ENST00000413042 2259 ntBASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2BQ9UQN3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CHMP2BQ9UQN3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.39■□□□□ 0.7
CHMP2BQ9UQN3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP2BQ9UQN3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 AC090164.3-201ENST00000610780 2143 ntBASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms